URMC / Labs / Padmanabhan Lab / Publications

Recent Publications

1. Chen Z
2. Padmanabhan K
Adult-neurogenesis allows for representational stability and flexibility in early olfactory system.; bioRxiv : the preprint server for biology. 2024 Jul 04.
1. Sandoval SO
2. Cappuccio G
3. Kruth K
4. Osenberg S
5. Khalil SM
6. Méndez-Albelo NM
7. Padmanabhan K
8. Wang D
9. Niciu MJ
10. Bhattacharyya A
11. Stein JL
12. Sousa AMM
13. Waxman EA
14. Buttermore ED
15. Whye D
16. Sirois CL
17. Williams A
18. Maletic-Savatic M
19. Zhao X
Rigor and reproducibility in human brain organoid research: Where we are and where we need to go.; Stem cell reports. 2024 May 10.
1. Chockanathan U
2. Padmanabhan K
Differential disruptions in population coding along the dorsal-ventral axis of CA1 in the APP/PS1 mouse model of Aβ pathology.; PLoS computational biology; Vol 20(5), pp. e1012085. 2024 May 06.
1. Pasini FW
2. Busch AN
3. Mináč J
4. Padmanabhan K
5. Muller L
Algebraic approach to spike-time neural codes in the hippocampus.; Physical review. E; Vol 108(5-1), pp. 054404. 2023 Nov.
1. Feng G
2. Joseph A
3. Dholakia K
4. Shang F
5. Pfeifer CW
6. Power D
7. Padmanabhan K
8. Schallek J
High-resolution structural and functional retinal imaging in the awake behaving mouse.; Communications biology; Vol 6(1), pp. 572. 2023 May 29.
1. Uzun YS
2. Santos R
3. Marchetto MC
4. Padmanabhan K
Network size affects the complexity of activity in human iPSC-derived neuronal populations.; bioRxiv : the preprint server for biology. 2023 Jan 02.
1. Villanueva DM
2. Taunk P
3. Krishnan P
4. Figueroa N
Emerging Multiorgan Klebsiella pneumoniae Invasive Syndrome Leading to Septic Shock: A Case Report and Review of the Literature.; Cureus; Vol 14(7), pp. e26647. 2022 Jul 07.
1. Chen Z
2. Padmanabhan K
Top-down feedback enables flexible coding strategies in the olfactory cortex.; Cell reports; Vol 38(12). 2022 Mar 22.
1. Chockanthan U
2. Padmanabhan K
From synapses to circuits and back: bridging levels of understanding in animal models of Alzheimer disease.; The European journal of neuroscience. 2022 Mar 04.
1. Chockanathan U
2. Padmanabhan K
Divergence in Population Coding for Space between Dorsal and Ventral CA1.; eNeuro. 2021 Aug 25.
1. Chockanathan U
2. Crosier EJW
3. Waddle S
4. Lyman E
5. Gerkin RC
6. Padmanabhan K
Changes in pair-wise correlations during running reshapes global network state in the main olfactory bulb.; Journal of neurophysiology. 2021 Mar 03.
1. Chockanathan U
2. Warner EJ
3. Turpin L
4. O'Banion MK
5. Padmanabhan K
Altered dorsal CA1 neuronal population coding in the APP/PS1 mouse model of Alzheimer's disease.; Scientific reports; Vol 10(1). 2020 Jan 23.
1. Chen Z
2. Padmanabhan K
Top-Down Control of Inhibitory Granule Cells in the Main Olfactory Bulb Reshapes Neural Dynamics Giving Rise to a Diversity of Computations.; Frontiers in computational neuroscience; Vol 14. 2020.
1. Warner EJ
2. Padmanabhan K
Sex Differences in Head-fixed Voluntary Running Behavior in C57BL/6J mice.; The European journal of neuroscience. 2019 Dec 18.
1. Marchetto MC
2. Hrvoj-Mihic B
3. Kerman BE
4. Yu DX
5. Vadodaria KC
6. Linker SB
7. Narvaiza I
8. Santos R
9. Denli AM
10. Mendes AP
11. Oefner R
12. Cook J
13. McHenry L
14. Grasmick JM
15. Heard K
16. Fredlender C
17. Randolph-Moore L
18. Kshirsagar R
19. Xenitopoulos R
20. Chou G
21. Hah N
22. Muotri AR
23. Padmanabhan K
24. Semendeferi K
25. Gage FH
Species-specific maturation profiles of human, chimpanzee and bonobo neural cells.; eLife; Vol 8. 2019 Feb 07.
1. Sarkar A
2. Mei A
3. Paquola ACM
4. Stern S
5. Bardy C
6. Klug JR
7. Kim S
8. Neshat N
9. Kim HJ
10. Ku M
11. Shokhirev MN
12. Adamowicz DH
13. Marchetto MC
14. Jappelli R
15. Erwin JA
16. Padmanabhan K
17. Shtrahman M
18. Jin X
19. Gage FH
Efficient Generation of CA3 Neurons from Human Pluripotent Stem Cells Enables Modeling of Hippocampal Connectivity In Vitro.; Cell stem cell; Vol 22(5). 2018 May 03.
1. Padmanabhan K
2. Osakada F
3. Tarabrina A
4. Kizer E
5. Callaway EM
6. Gage FH
7. Sejnowski TJ
Centrifugal Inputs to the Main Olfactory Bulb Revealed Through Whole Brain Circuit-Mapping.; Frontiers in neuroanatomy; Vol 12. 2018.
1. Marchetto MC
2. Belinson H
3. Tian Y
4. Freitas BC
5. Fu C
6. Vadodaria K
7. Beltrao-Braga P
8. Trujillo CA
9. Mendes APD
10. Padmanabhan K
11. Nunez Y
12. Ou J
13. Ghosh H
14. Wright R
15. Brennand K
16. Pierce K
17. Eichenfield L
18. Pramparo T
19. Eyler L
20. Barnes CC
21. Courchesne E
22. Geschwind DH
23. Gage FH
24. Wynshaw-Boris A
25. Muotri AR
Altered proliferation and networks in neural cells derived from idiopathic autistic individuals.; Molecular psychiatry; Vol 22(6). 2017 Jun.
1. Padmanabhan K
2. Osakada F
3. Tarabrina A
4. Kizer E
5. Callaway EM
6. Gage FH
7. Sejnowski TJ
Diverse Representations of Olfactory Information in Centrifugal Feedback Projections.; The Journal of neuroscience : the official journal of the Society for Neuroscience; Vol 36(28). 2016 Jul 13.
1. Wang W
2. Tripathy SJ
3. Padmanabhan K
4. Urban NN
5. Kass RE
An Empirical Model for Reliable Spiking Activity.; Neural computation; Vol 27(8). 2015 Aug.
1. Padmanabhan K
2. Urban NN
Disrupting information coding via block of 4-AP-sensitive potassium channels.; Journal of neurophysiology; Vol 112(5). 2014 Sep 1.
1. Tripathy SJ
2. Padmanabhan K
3. Gerkin RC
4. Urban NN
Intermediate intrinsic diversity enhances neural population coding.; Proceedings of the National Academy of Sciences of the United States of America; Vol 110(20). 2013 May 14.
1. Padmanabhan K
2. Eddy WF
3. Crowley JC
A novel algorithm for optimal image thresholding of biological data.; Journal of neuroscience methods; Vol 193(2). 2010 Nov 30.
1. Padmanabhan K
2. Andrews SE
3. Fitzpatrick JA
Multi-photon imaging.; Current protocols in cytometry / editorial board, J. Paul Robinson, managing editor ... [et al.]; Vol Chapter 2. 2010 Oct.
1. Padmanabhan K
2. Urban NN
Intrinsic biophysical diversity decorrelates neuronal firing while increasing information content.; Nature neuroscience; Vol 13(10). 2010 Oct.
1. Hovis KR
2. Padmanabhan K
3. Urban NN
A simple method of in vitro electroporation allows visualization, recording, and calcium imaging of local neuronal circuits.; Journal of neuroscience methods; Vol 191(1). 2010 Aug 15.
1. Gräub R
2. Lancero H
3. Pedersen A
4. Chu M
5. Padmanabhan K
6. Xu XQ
7. Spitz P
8. Chalkley R
9. Burlingame AL
10. Stokoe D
11. Bernstein HS
Cell cycle-dependent phosphorylation of human CDC5 regulates RNA processing.; Cell cycle (Georgetown, Tex.); Vol 7(12). 2008 Jun 15.
1. Hlaing M
2. Spitz P
3. Padmanabhan K
4. Cabezas B
5. Barker CS
6. Bernstein HS
E2F-1 regulates the expression of a subset of target genes during skeletal myoblast hypertrophy.; The Journal of biological chemistry; Vol 279(42). 2004 Oct 15.