Publications

• 1. Kiliushik D
  2. Goenner C
  3. Law M
  4. Schroeder GM
  5. Srivastava Y
  6. Jenkins JL
  7. Wedekind JE
  Knotty is nice: metabolite binding and RNA-mediated gene regulation by the preQ1 riboswitch family.; The Journal of biological chemistry. 2024 Oct 30.
• 1. Srivastava Y
  2. Akinyemi O
  3. Rohe TC
  4. Pritchett EM
  5. Baker CD
  6. Sharma A
  7. Jenkins JL
  8. Mathews DH
  9. Wedekind JE
  Two riboswitch classes that share a common ligand-binding fold show major differences in the ability to accommodate mutations.; Nucleic acids research. 2024 Oct 16.
• 1. Poruthoor AJ
  2. Stallone JJ
  3. Miaro M
  4. Sharma A
  5. Grossfield A
  System size effects on the free energy landscapes from molecular dynamics of phase-separating bilayers.; The Journal of chemical physics; Vol 161(14). 2024 Oct 14.
• 1. Beard JW
  2. Hunt SL
  3. Evans A
  4. Goenner C
  5. Miller BL
  Mimicking a Cellular Crowding Environment for Enzyme-Free Paper-Based Nucleic Acid Tests at the Point of Care.; ACS sensors. 2024 Sep 30.
• 1. Pan Y
  2. Adachi H
  3. He X
  4. Chen JL
  5. Yu YT
  6. Boutz PL
  Updated Pseudo-seq Protocol for Transcriptome-Wide Detection of Pseudouridines.; Bio-protocol; Vol 14(9), pp. e4985. 2024 May 05.
• 1. Beard JW
  2. Hunt SL
  3. Evans A
  4. Goenner C
  5. Miller BL
  Mimicking an in cellulo environment for enzyme-free paper-based nucleic acid tests at the point of care.; bioRxiv : the preprint server for biology. 2024 Feb 29.
• 1. Poruthoor AJ
  2. Sharma A
  3. Grossfield A
  Understanding the Free Energy Landscape of Phase Separation in Lipid Bilayers using Molecular Dynamics.; Biophysical journal. 2023 Sep 22.
• 1. Adachi H
  2. Pan Y
  3. He X
  4. Chen JL
  5. Klein B
  6. Platenburg G
  7. Morais P
  8. Boutz P
  9. Yu YT
  Targeted pseudouridylation: An approach for suppressing nonsense mutations in disease genes.; Molecular cell. 2023 Feb 03.
• 1. Poruthoor AJ
  2. Grossfield A
  Understanding the Free Energy Landscape of Phase Separation in Lipid Bilayers using Molecular Dynamics.; bioRxiv : the preprint server for biology. 2023 Feb 03.
• 1. Srivastava Y
  2. Blau ME
  3. Jenkins JL
  4. Wedekind JE
  Full-Length NAD+-I Riboswitches Bind a Single Cofactor but Cannot Discriminate against Adenosine Triphosphate.; Biochemistry. 2023 Jan 10.
• 1. Michel LV
  2. Kaur R
  3. Gleghorn ML
  4. Holmquist M
  5. Pryharski K
  6. Perdue J
  7. Jones SP
  8. Jackson N
  9. Pilo I
  10. Kasper A
  11. Labbe N
  12. Pichichero M
  Haemophilus influenzae Protein D antibody suppression in a multi-component vaccine formulation.; FEBS open bio; Vol 12(12), pp. 2191-2202. 2022 Oct 28.
• 1. Jones SP
  2. Cook KH
  3. Holmquist ML
  4. Almekinder LJ
  5. Delaney AM
  6. Charles R
  7. Labbe N
  8. Perdue J
  9. Jackson N
  10. Pichichero ME
  11. Kaur R
  12. Michel LV
  13. Gleghorn ML
  Vaccine target and carrier molecule nontypeable Haemophilus influenzae protein D dimerizes like the close Escherichia coli GlpQ homolog but unlike other known homolog dimers.; Proteins; Vol 91(2), pp. 161-170. 2022 Sep 16.
• 1. Seckler JM
  2. Robinson EN
  3. Lewis SJ
  4. Grossfield A
  Surveying non-visual arrestins reveals allosteric interactions between functional sites.; Proteins. 2022 Aug 21.
• 1. Galardi JW
  2. Bela VN
  3. Jeffery N
  4. He X
  5. Glasser E
  6. Loerch S
  7. Jenkins JL
  8. Pulvino MJ
  9. Boutz PL
  10. Kielkopf CL
  A UHM - ULM interface with unusual structural features contributes to U2AF2 and SF3B1 association for pre-mRNA splicing.; The Journal of biological chemistry. 2022 Jun 30.
• 1. Jones SP
  2. Goossen C
  3. Lewis SD
  4. Delaney AM
  5. Gleghorn ML
  Not making the cut: Techniques to prevent RNA cleavage in structural studies of RNase-RNA complexes.; Journal of structural biology: X; Vol 6, pp. 100066. 2022 Mar 11.
• 1. Rook ML
  2. Miaro M
  3. Couch T
  4. Kneisley DL
  5. Musgaard M
  6. MacLean DM
  Mutation of a conserved glutamine residue does not abolish desensitization of acid-sensing ion channel 1.; The Journal of general physiology; Vol 153(8). 2021 Aug 02.
• 1. Srivastava Y
  2. Bonn-Breach R
  3. Chavali SS
  4. Lippa GM
  5. Jenkins JL
  6. Wedekind JE
  Affinity and Structural Analysis of the U1A RNA Recognition Motif with Engineered Methionines to Improve Experimental Phasing.; Crystals; Vol 11(3). 2021 Mar.
• 1. Beard JW
  2. Murty S
  3. Caulkins C
  4. Strenk AR
  5. Luta EP
  6. Hunt SL
  7. Yates MZ
  8. Miller BL
  Leveraging Arylboronic Acid - Cellulose Binding as a Versatile and Scalable Approach to Hydrophobic Patterning.; Advanced materials technologies; Vol 7(7). 2021 Jan 16.