URMC / Labs / Benjamin Miller Lab / Publications Recent Publications Ajalik RELinares IAlenchery RGZhang VZWright TWMiller BLMcGrath JLAwad HA Human Tendon-on-a-Chip for Modeling the Myofibroblast Microenvironment in Peritendinous Fibrosis.; Advanced healthcare materials. 2024 Nov 15. Beard JWHunt SLEvans AGoenner CMiller BL Mimicking a Cellular Crowding Environment for Enzyme-Free Paper-Based Nucleic Acid Tests at the Point of Care.; ACS sensors. 2024 Sep 30. Bryan MRButt JNDing ZTokranova NCady NPiorek BMeinhart CTice JMiller BL A Multiplex "Disposable Photonics" Biosensor Platform and Its Application to Antibody Profiling in Upper Respiratory Disease.; ACS sensors. 2024 Mar 29. Beard JWHunt SLEvans AGoenner CMiller BL Mimicking an in cellulo environment for enzyme-free paper-based nucleic acid tests at the point of care.; bioRxiv : the preprint server for biology. 2024 Feb 29. Kosoy GMiller BL Two Decades of Arrayed Imaging Reflectometry for Sensitive, High-Throughput Biosensing.; Biosensors; Vol 13(9). 2023 Sep 05. Moran MCKlose AYoshida TDe Benedetto ASchneider LCOng PYSimpson ELLeung DYMMiller BLSeplaki CLBeck LA History of S. aureus Skin Infection Significantly Associates with History of Eczema Herpeticum in Patients with Atopic Dermatitis.; Dermatology and therapy. 2023 Aug 24. Passaro VMNSemenova YMiller BL Feature Papers in Optical Sensors 2022.; Sensors (Basel, Switzerland); Vol 23(7). 2023 Apr 03. Bryan MRButt JNBucukovski JMiller BL Biosensing with Silicon Nitride Microring Resonators Integrated with an On-Chip Filter Bank Spectrometer.; ACS sensors. 2023 Feb 14. Klose AMKosoy GMiller BL Arrayed Imaging Reflectometry monitoring of anti-viral antibody production throughout vaccination and breakthrough Covid-19.; PloS one; Vol 18(2), pp. e0277846. 2023 Feb 07. Farovitch LPadden CvanWijngaarden EMiller BLeydet BDye T Attitudes and experiences regarding preventive strategies for the deaf population in Western New York.; PLOS global public health; Vol 3(11), pp. e0001056. 2023 Jan 22. Cognetti JSMoen MTBrewer MGBryan MRTice JDMcGrath JLMiller BL A photonic biosensor-integrated tissue chip platform for real-time sensing of lung epithelial inflammatory markers.; Lab on a chip. 2023 Jan 03. Luta EPMiller BL Development of Methods for Specific Capture of Biological Targets on Aluminum Substrates: Application to Bacillus subtilis Spore Detection as a Model for Anthrax.; Sensors (Basel, Switzerland); Vol 22(9). 2022 Apr 30. Brewer MGMonticelli SRMoran MCMiller BLBeck LAWard BM Conditions That Simulate the Environment of Atopic Dermatitis Enhance Susceptibility of Human Keratinocytes to Vaccinia Virus.; Cells; Vol 11(8). 2022 Apr 14. Embong AKNguyen-Contant PWang JKanagaiah PChaves FAFitzgerald TFZhou QKosoy GBranche ARMiller BLZand MSSangster MYTopham DJ Formation and Expansion of Memory B Cells against Coronavirus in Acutely Infected COVID-19 Individuals.; Pathogens (Basel, Switzerland); Vol 11(2). 2022 Jan 29. Wang PMiller BL Waveguide-Enhanced Raman Spectroscopy (WERS): An Emerging Chip-Based Tool for Chemical and Biological Sensing.; Sensors (Basel, Switzerland); Vol 22(23). 2022 Jan 22. Ajalik REAlenchery RGCognetti JSZhang VZMcGrath JLMiller BLAwad HA Human Organ-on-a-Chip Microphysiological Systems to Model Musculoskeletal Pathologies and Accelerate Therapeutic Discovery.; Frontiers in bioengineering and biotechnology; Vol 10. 2022. Arévalo DMAnokhina VSSwart OLRMiller BL Expanding the known structure space for RNA binding: a test of 2,5-diketopiperazine.; Organic & biomolecular chemistry. 2021 Dec 20. Klose AMDaiss JLHo LBeck CAStriemer CCMuthukrishnan GMiller BL StaphAIR: A Label-Free Antigen Microarray Approach to Detecting Anti-Staphylococcus aureus Antibody Responses in Orthopedic Infections.; Analytical chemistry. 2021 Oct 01. Cognetti JSMiller BL Monitoring Serum Spike Protein with Disposable Photonic Biosensors Following SARS-CoV-2 Vaccination.; Sensors (Basel, Switzerland); Vol 21(17). 2021 Aug 31. Anokhina VSMiller BL Targeting Ribosomal Frameshifting as an Antiviral Strategy: From HIV-1 to SARS-CoV-2.; Accounts of chemical research. 2021 Aug 17. Cognetti JSSteiner DJAbedin MBryan MRShanahan CTokranova NYoung EKlose AMZavriyev AJudy NPiorek BMeinhart CJakubowicz RWarren HCady NCMiller BL Disposable photonics for cost-effective clinical bioassays: application to COVID-19 antibody testing.; Lab on a chip. 2021 Jun 23. Zhang HKlose AMMiller BL Label-Free, Multiplex Glycan Microarray Biosensor for Influenza Virus Detection.; Bioconjugate chemistry. 2021 Feb 09. Beard JWMurty SCaulkins CStrenk ARLuta EPHunt SLYates MZMiller BL Leveraging Arylboronic Acid - Cellulose Binding as a Versatile and Scalable Approach to Hydrophobic Patterning.; Advanced materials technologies; Vol 7(7). 2021 Jan 16. Klose AMMiller BL A Stable Biotin-Streptavidin Surface Enables Multiplex, Label-Free Protein Detection by Aptamer and Aptamer-Protein Arrays Using Arrayed Imaging Reflectometry.; Sensors (Basel, Switzerland); Vol 20(20). 2020 Oct 10. Steiner DJCognetti JSLuta EPKlose AMBucukovski JBryan MRSchmuke JJNguyen-Contant PSangster MYTopham DJMiller BL Array-based analysis of SARS-CoV-2, other coronaviruses, and influenza antibodies in convalescent COVID-19 patients.; Biosensors & bioelectronics; Vol 169. 2020 Sep 21. Chen WFitzpatrick JMonroy-Trujillo JMSozio SMJaar BGEstrella MMSerrano JAnokhina VMiller BLMelamed MLBushinsky DAParekh RS Associations of Serum Calciprotein Particle Size and Transformation Time with Arterial Calcification, Arterial Stiffness, and Mortality in Incident Hemodialysis Patients.; American journal of kidney diseases : the official journal of the National Kidney Foundation. 2020 Aug 12. Martinez-Sobrido LBlanco-Lobo PRodriguez LFitzgerald TZhang HNguyen PAnderson CSHolden-Wiltse JBandyopadhyay SNogales ADeDiego MLWasik BRMiller BLHenry CWilson PCSangster MYTreanor JJTopham DJByrd-Leotis LSteinhauer DACummings RDLuczo JMTompkins SMSakamoto KJones CASteel JLowen ACDanzy STao HFink ALKlein SLWohlgemuth NFenstermacher KJEl Najjar FPekosz ASauer LLewis MKShaw-Saliba KRothman RELiu ZYChen KFParrish CRVoorhees IEHKawaoka YNeumann GChiba SFan SHatta MKong HZhong GWang GUccellini MBGarcía-Sastre APerez DRFerreri LMHerfst SRichard MFouchier RBurke DPattinson DSmith DJMeliopoulos VFreiden PLivingston BSharp BCherry SDib JCYang GRussell CJBarman SWebby RJKrauss SDanner AWoodard KPeiris MPerera RAPMChan MCWGovorkova EAMarathe BMPascua PNQSmith GLi YTThomas PGSchultz-Cherry S Characterizing Emerging Canine H3 Influenza Viruses.; PLoS pathogens; Vol 16(4). 2020 Apr. Tyndall NFStievater THKozak DAPruessner MWRoxworthy BJRabinovich WSRoberts CAMcGill RAMiller BLLuta EYates MZ Figure-of-Merit Characterization of Hydrogen-Bond Acidic Sorbents for Waveguide-Enhanced Raman Spectroscopy.; ACS sensors; Vol 5(3). 2020 Mar 27. Farrar CSRouin GTMiller BLRaeman CHMooney NAHocking DC A Matricryptic Conformation of the Integrin-Binding Domain of Fibronectin Regulates Platelet-Derived Growth Factor-Induced Intracellular Calcium Release.; Cells; Vol 8(11). 2019 Oct 30. Brewer MGAnderson EAPandya RPDe Benedetto AYoshida THilimire TAMartinez-Sobrido LBeck LAMiller BL Peptides Derived from the Tight Junction Protein, Claudin-1, Disrupt Skin Barrier and Promote Responsiveness to an Epicutaneous Vaccine.; The Journal of investigative dermatology. 2019 Aug 02. Zhang HMiller BL Immunosensor-based label-free and multiplex detection of influenza viruses: State of the art.; Biosensors & bioelectronics; Vol 141. 2019 Jun 25. Anokhina VSMcAnany JDCiesla JHHilimire TASantoso NMiao HMiller BL Enhancing the ligand efficiency of anti-HIV compounds targeting frameshift-stimulating RNA.; Bioorganic & medicinal chemistry. 2019 May 09. Ghosh RSwart OWestgate SMiller BLYates MZ Antibacterial Copper-Hydroxyapatite Composite Coatings via Electrochemical Synthesis.; Langmuir : the ACS journal of surfaces and colloids. 2019 Apr 18. McAnany JDMiller BL Dynamic combinatorial chemistry as a rapid method for discovering sequence-selective RNA-binding compounds.; Methods in enzymology; Vol 623. 2019. Zhang HHenry CAnderson CSNogales ADeDiego MLBucukovski JMartinez-Sobrido LWilson PCTopham DJMiller BL Crowd on a Chip: Label-Free Human Monoclonal Antibody Arrays for Serotyping Influenza.; Analytical chemistry. 2018 Jul 09. Bucukovski JCarter JAStriemer CCMüllner SSchulte-Pelkum JSchulz-Knappe PMiller BL Label-free microarray-based detection of autoantibodies in human serum.; Journal of immunological methods. 2018 May 23. Chen WAnokhina VDieudonne GAbramowitz MKKashyap RYan CWu TTde Mesy Bentley KLMiller BLBushinsky DA Patients with advanced chronic kidney disease and vascular calcification have a large hydrodynamic radius of secondary calciprotein particles.; Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association. 2018 May 16. Hilimire TAChamberlain JMAnokhina VBennett RPSwart OMyers JRAshton JMStewart RAFeatherston ALGates KHelms EDSmith HCDewhurst SMiller BL HIV-1 Frameshift RNA-Targeted Triazoles Inhibit Propagation of Replication-Competent and Multi-Drug-Resistant HIV in Human Cells.; ACS chemical biology. 2017 May 05. Baker JESriram RMiller BL Recognition-mediated particle detection under microfluidic flow with waveguide-coupled 2D photonic crystals: towards integrated photonic virus detectors.; Lab on a chip. 2017 Mar 30. Dutt SBinney RJHeuer HWLuong PAttygalle SBhatt PMarx GAElofson JTartaglia MCLitvan IMcGinnis SMDickerson BCKornak JWaltzman DVoltarelli LSchuff NRabinovici GDKramer JHJack CRMiller BLRosen HJBoxer AL Progression of brain atrophy in PSP and CBS over 6 months and 1 year.; Neurology; Vol 87(19). 2016 Nov 08. Carter JATriplett EStriemer CCMiller BL A label-free, multiplex competitive assay for small molecule pollutants.; Biosensors & bioelectronics; Vol 77. 2016 Mar 15. McAnany JDReichert JPMiller BL Probing the geometric constraints of RNA binding via dynamic covalent chemistry.; Bioorganic & medicinal chemistry. 2016 Feb 24. Hilimire TABennett RPStewart RAGarcia-Miranda PBlume ABecker JSherer NHelms EDButcher SESmith HCMiller BL N-Methylation as a Strategy for Enhancing the Affinity and Selectivity of RNA-binding Peptides: Application to the HIV-1 Frameshift-Stimulating RNA.; ACS chemical biology; Vol 11(1). 2016 Jan 15. Miller BL mRNA regulation: A patch for a splice.; Nature chemical biology; Vol 11(7). 2015 Jul. Baker JESriram RMiller BL Two-dimensional photonic crystals for sensitive microscale chemical and biochemical sensing.; Lab on a chip; Vol 15(4). 2015 Feb 21. Kapogiannis DBoxer ASchwartz JBAbner ELBiragyn AMasharani UFrassetto LPetersen RCMiller BLGoetzl EJ Dysfunctionally phosphorylated type 1 insulin receptor substrate in neural-derived blood exosomes of preclinical Alzheimer's disease.; FASEB journal : official publication of the Federation of American Societies for Experimental Biology; Vol 29(2). 2015 Feb. Bucukovski JLatorre-Margalef NStallknecht DEMiller BL A Multiplex Label-Free Approach to Avian Influenza Surveillance and Serology.; PloS one; Vol 10(8). 2015. Le NTTakei YIzawa-Ishizawa YHeo KSLee HSmrcka AVMiller BLKo KATure SMorrell CFujiwara KAkaike MAbe J Identification of activators of ERK5 transcriptional activity by high-throughput screening and the role of endothelial ERK5 in vasoprotective effects induced by statins and antimalarial agents.; Journal of immunology (Baltimore, Md. : 1950); Vol 193(7). 2014 Oct 1. Fiandaca MSKapogiannis DMapstone MBoxer AEitan ESchwartz JBAbner ELPetersen RCFederoff HJMiller BLGoetzl EJ Identification of preclinical Alzheimer's disease by a profile of pathogenic proteins in neurally derived blood exosomes: A case-control study.; Alzheimer's & dementia : the journal of the Alzheimer's Association. 2014 Aug 14. Hoskins JWOfori LOChen CZKumar ASobczak KNakamori MSouthall NPatnaik SMarugan JJZheng WAustin CPDisney MDMiller BLThornton CA Lomofungin and dilomofungin: inhibitors of MBNL1-CUG RNA binding with distinct cellular effects.; Nucleic acids research; Vol 42(10). 2014 Jun.