Welcome to the Thakar Lab

• 1. Niarakis A
  2. Laubenbacher R
  3. An G
  4. Ilan Y
  5. Fisher J
  6. Flobak Å
  7. Reiche K
  8. Rodríguez Martínez M
  9. Geris L
  10. Ladeira L
  11. Veschini L
  12. Blinov ML
  13. Messina F
  14. Fonseca LL
  15. Ferreira S
  16. Montagud A
  17. Noël V
  18. Marku M
  19. Tsirvouli E
  20. Torres MM
  21. Harris LA
  22. Sego TJ
  23. Cockrell C
  24. Shick AE
  25. Balci H
  26. Salazar A
  27. Rian K
  28. Hemedan AA
  29. Esteban-Medina M
  30. Staumont B
  31. Hernandez-Vargas E
  32. Martis B S
  33. Madrid-Valiente A
  34. Karampelesis P
  35. Sordo Vieira L
  36. Harlapur P
  37. Kulesza A
  38. Nikaein N
  39. Garira W
  40. Malik Sheriff RS
  41. Thakar J
  42. Tran VDT
  43. Carbonell-Caballero J
  44. Safaei S
  45. Valencia A
  46. Zinovyev A
  47. Glazier JA
  Immune digital twins for complex human pathologies: applications, limitations, and challenges.; NPJ systems biology and applications; Vol 10(1), pp. 141. 2024 Nov 30.
• 1. Wang RH
  2. Thakar J
  Comparative analysis of single-cell pathway scoring methods and a novel approach.; NAR genomics and bioinformatics; Vol 6(3), pp. lqae124. 2024 Sep 24.
• 1. Cornwell AB
  2. Zhang Y
  3. Thondamal M
  4. Johnson DW
  5. Thakar J
  6. Samuelson AV
  The C. elegans Myc-family of transcription factors coordinate a dynamic adaptive response to dietary restriction.; GeroScience. 2024 Jun 15.
• 1. Dunlap G
  2. Wagner A
  3. Meednu N
  4. Wang R
  5. Zhang F
  6. Ekabe JC
  7. Jonsson AH
  8. Wei K
  9. Sakaue S
  10. Nathan A
  11. Bykerk VP
  12. Donlin LT
  13. Goodman SM
  14. Firestein GS
  15. Boyle DL
  16. Holers VM
  17. Moreland LW
  18. Tabechian D
  19. Pitzalis C
  20. Filer A
  21. Raychaudhuri S
  22. Brenner MB
  23. Thakar J
  24. McDavid A
  25. Rao DA
  26. Anolik JH
  Clonal associations between lymphocyte subsets and functional states in rheumatoid arthritis synovium.; Nature communications; Vol 15(1), pp. 4991. 2024 Jun 11.
• 1. Mosmann TR
  2. Rebhahn JA
  3. De Rosa SC
  4. Keefer MC
  5. McElrath MJ
  6. Rouphael NG
  7. Pantaleo G
  8. Gilbert PB
  9. Corey L
  10. Kobie JJ
  11. Thakar J
  SWIFT clustering analysis of intracellular cytokine staining flow cytometry data of the HVTN 105 vaccine trial reveals high frequencies of HIV-specific CD4+ T cell responses and associations with humoral responses.; Frontiers in immunology; Vol 15, pp. 1347926. 2024 Jun 06.
• 1. Kassis G
  2. Palshikar MG
  3. Hilchey SP
  4. Zand MS
  5. Thakar J
  Discrete-state models identify pathway specific B cell states across diseases and infections at single-cell resolution.; Journal of theoretical biology. 2024 Feb 27.

Affiliations

• Microbiology & Immunology
• Center for Biomedical Informatics
• NIH T32 Training Grant in Immunology
• Biomedical Genetics and Genomics Ph.D. Program
• Biophysics, Structural & Computational Biology Ph.D. Program
• Immunology, Microbiology, and Virology Ph.D. Program
• PhD Program in Pathology - Cell Biology of Disease
• Translational Biomedical Science Ph.D. Program
• Program for Advanced Immune Bioimaging

August 10, 2020
Thakar Lab publishes article on the Impact of vaccine type on HIV-1 vaccine elicited antibody durability and B cell gene signature

August 3, 2019
Celebrating Juilee’s promotion to Associate level and acceptance of Rohith’s paper in PLoS Computational Biology

July 16, 2019
Juilee presented on use of metabolomics to infer signatures of HIV vaccine response at HVTN2019

March 16, 2019
Rohith Palli presenting at Cold Spring Harbor Systems Immunology meeting

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