Recent Publications
Recent Publications
- Fluid flow impacts endothelial-monocyte interactions in a model of vascular inflammatory fibrosis.; Scientific reports; Vol 15(1), pp. 3227. 2025 Jan 25.
- Reply to Takefuji.; Gastroenterology. 2025 Jan 25.
- Nitrosyl factors play a vital role in the ventilatory depressant effects of fentanyl in freely moving guinea pigs.; Biomedicine & pharmacotherapy = Biomedecine & pharmacotherapie; Vol 183, pp. 117847. 2025 Jan 24.
- Schizosaccharomyces pombe pus1 mutants are temperature sensitive due to decay of tRNAIle(UAU) by the 5'-3' exonuclease Dhp1, primarily targeting the unspliced pre-tRNA.; RNA (New York, N.Y.). 2025 Jan 23.
- Recurrent oncogenic ZC3H18 mutations stabilize endogenous retroviral RNA.; bioRxiv : the preprint server for biology. 2025 Jan 14.
- 40S ribosomal subunits scan mRNA for the start codon by one-dimensional diffusion.; bioRxiv : the preprint server for biology. 2025 Jan 04.
- Sequence Design Using RNAstructure.; Methods in molecular biology (Clifton, N.J.); Vol 2847, pp. 17-31. 2025.
- Essential Considerations for Free Energy Calculations of RNA-Small Molecule Complexes: Lessons from the Theophylline-Binding RNA Aptamer.; Journal of chemical information and modeling. 2024 Dec 19.
- A whole food, plant-based diet reduces amino acid levels in patients with metastatic breast cancer.; Cancer & metabolism; Vol 12(1), pp. 38. 2024 Dec 19.
- Exploring the therapeutic potential of modulating nonsense-mediated mRNA decay.; RNA (New York, N.Y.). 2024 Dec 12.
- Sampling-based Continuous Optimization with Coupled Variables for RNA Design.; ArXiv. 2024 Dec 11.
- Modeling and NMR Data Elucidate the Structure of a G-Quadruplex-Ligand Interaction for a Pu22T-Cyclometalated Iridium(III) System.; The journal of physical chemistry. B. 2024 Nov 19.
- Structural impact of 3-methylcytosine modification on the anticodon stem of a neuronally-enriched arginine tRNA.; bioRxiv : the preprint server for biology. 2024 Nov 18.
- Human Tendon-on-a-Chip for Modeling the Myofibroblast Microenvironment in Peritendinous Fibrosis.; Advanced healthcare materials. 2024 Nov 15.
- Using the RNAstructure Software Package to Predict Conserved RNA Structures.; Current protocols; Vol 4(11), pp. e70054. 2024 Nov.
- Knotty is nice: metabolite binding and RNA-mediated gene regulation by the preQ1 riboswitch family.; The Journal of biological chemistry. 2024 Oct 30.
- memerna: Sparse RNA Folding Including Coaxial Stacking.; Journal of molecular biology. 2024 Oct 18.
- Cyclic peptides targeting the SARS-CoV-2 programmed ribosomal frameshifting RNA from a multiplexed phage display library.; Chemical science. 2024 Oct 17.
- Two riboswitch classes that share a common ligand-binding fold show major differences in the ability to accommodate mutations.; Nucleic acids research. 2024 Oct 16.
- DecoyFinder: Identification of Contaminants in Sets of Homologous RNA Sequences.; bioRxiv : the preprint server for biology. 2024 Oct 15.