URMC / Lung Biology and Disease Program / Research / Publications Publications Shaikh SBBalaya RDADagamajalu SBhandary YPUnwalla HPrasad TSKRahman I A signaling pathway map of plasminogen activator inhibitor-1 (PAI-1/SERPINE-1): a review of an innovative frontier in molecular aging and cellular senescence.; Cell communication and signaling : CCS; Vol 22(1), pp. 544. 2024 Nov 14. Nguyen NDRosas LKhaliullin TJiang PHasanaj EOvando-Ricardez JABueno MRahman IPryhuber GSLi DMa QFinkel TKönigshoff MEickelberg ORojas MMora ALLugo-Martinez JBar-Joseph Z scDOT: optimal transport for mapping senescent cells in spatial transcriptomics.; Genome biology; Vol 25(1), pp. 288. 2024 Nov 08. Nkosi DCrowe WEAltman BJOltvai ZNGiampoli EJVelez MJ SATB2 is an Emergent Biomarker of Anaplastic Thyroid Carcinoma: A Series with Comprehensive Biomarker and Molecular Studies.; Endocrine pathology. 2024 Nov 05. Lehmann MKrishnan RSucre JKulkarni HSPineda RHAnderson CBanovich NEBehrsing HPDean CHHaak AGosens RKaminski NZagorska AKoziol-White CMetcalf JPKim YHLoebel CNeptune ENoel ARaghu GSewald KSharma ASuki BSperling ATatler ATurner SRosas IOvan Ry PWille TRandell SHPryhuber GRojas MBourke JKönigshoff M Precision Cut Lung Slices: Emerging Tools for Preclinical and Translational Lung Research. An Official American Thoracic Society Workshop Report.; American journal of respiratory cell and molecular biology. 2024 Nov 05. Millar MWNajar RASlavin SAShadab MTahir IMahamed ZLin XAbe JIWright TWDean DAFazal FRahman A MTOR maintains endothelial cell integrity to limit lung vascular injury.; The Journal of biological chemistry. 2024 Nov 05. Vizza CDKlok RHarley JSmall MScott MLautsch DWhite RJ Clinical Characteristics and Treatment of Patients Diagnosed with Pulmonary Arterial Hypertension: A Real-World Study in the USA, Europe and Japan.; Advances in therapy. 2024 Nov 04. Virkud YVStyles JNKelly RSPatil SURuiter BSmith NPClish CWheelock CECeledón JCLitonjua AABunyavanich SWeiss STBaker ESLasky-Su JAShreffler WG Immunomodulatory metabolites in IgE-mediated food allergy and oral immunotherapy outcomes based on metabolomic profiling.; Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology; Vol 35(11), pp. e14267. 2024 Nov. Lin XBai HBarravecchia MNorman RSchiralli Lester GMKottmann RMLeonard ARahman AYoung JLDean DA Occludin Is Essential to Maintain Normal Alveolar Barrier Integrity and Its Protective Role During ARDS Progression.; International journal of molecular sciences; Vol 25(21). 2024 Oct 29. Ushakumary MGFeng SBandyopadhyay GOlson HWeitz KKHuyck HLPoole CPurkerson JMBhattacharya SLjungberg MCMariani TJDeutsch GHMisra RSCarson JPAdkins JNPryhuber GSClair G Cell Population-resolved Multi-Omics Atlas of the Developing Lung.; American journal of respiratory cell and molecular biology. 2024 Oct 24. Kaur GWang QTjitropranoto AUnwalla HRahman I Cold ischemia time alters cell-type specific senescence leading to loss of cellular integrity in mouse lungs.; Experimental lung research; Vol 50(1), pp. 184-198. 2024 Oct 20. Scales TQSmith BBlanchard LMWixom NTuttle ETAltman BJPeppone LJMunger JCampbell TMCampbell EKHarris IS A whole food, plant-based diet reduces amino acid levels in patients with metastatic breast cancer.; medRxiv : the preprint server for health sciences. 2024 Oct 09. Veličković DPurkerson JBhotika HHuyck HClair GPryhuber GSAnderton C Integrating N -glycan and CODEX imaging reveal cell-specific protein glycosylation in healthy human lung.; bioRxiv : the preprint server for biology. 2024 Oct 08. Peacock JLCoto SDRees JRSauzet OJensen ETFichorova RDunlop ALPaneth NPadula AWoodruff TMorello-Frosch RTrowbridge JGoin DMaldonado LENiu ZGhassabian ATransande LFerrara ACroen LAAlexeeff SBreton CLitonjua AO'Connor TGLyall KVolk HAlshawabkeh AManjourides JCamargo CADabelea DHockett CWBendixsen CGHertz-Picciotto ISchmidt RJHipwell AEKeenan KKarr CLeWinn KZLester BCamerota MGaniban JMcEvoy CElliott MRSathyanarayana SJi NBraun JMKaragas MR Do small effects matter more in vulnerable populations? an investigation using Environmental influences on Child Health Outcomes (ECHO) cohorts.; BMC public health; Vol 24(1), pp. 2655. 2024 Sep 28. Peng WChung KBLawrence BPO'Banion MKDirksen RTWojtovich APOnukwufor JO DMT1 knockout abolishes ferroptosis induced mitochondrial dysfunction in C. elegans amyloid β proteotoxicity.; Free radical biology & medicine. 2024 Sep 22. Shaikh SBRahman I Cav1 Scaffolding Domain Peptide (CSP7): A Novel Target for Idiopathic Pulmonary Fibrosis.; American journal of respiratory cell and molecular biology. 2024 Sep 18.