Department of Pediatrics / Pryhuber Research Lab / Publications

Publications

1. Deshmukh H
2. Whitsett J
3. Zacharias W
4. Way SS
5. Martinez FD
6. Mizgerd J
7. Pryhuber G
8. Ambalavanan N
9. Bacharier L
10. Natarajan A
11. Tamburro R
12. Lin S
13. Randolph A
14. Nino G
15. Mejias A
16. Ramilo O
Impact of Viral Lower Respiratory Tract Infection (LRTI) in Early Childhood (0-2 Years) on Lung Growth and Development and Lifelong Trajectories of Pulmonary Health: A National Institutes of Health (NIH) Workshop Summary.; Pediatric pulmonology. 2024 Nov 20.
1. Nguyen ND
2. Rosas L
3. Khaliullin T
4. Jiang P
5. Hasanaj E
6. Ovando-Ricardez JA
7. Bueno M
8. Rahman I
9. Pryhuber GS
10. Li D
11. Ma Q
12. Finkel T
13. Königshoff M
14. Eickelberg O
15. Rojas M
16. Mora AL
17. Lugo-Martinez J
18. Bar-Joseph Z
scDOT: optimal transport for mapping senescent cells in spatial transcriptomics.; Genome biology; Vol 25(1), pp. 288. 2024 Nov 08.
1. Lehmann M
2. Krishnan R
3. Sucre J
4. Kulkarni HS
5. Pineda RH
6. Anderson C
7. Banovich NE
8. Behrsing HP
9. Dean CH
10. Haak A
11. Gosens R
12. Kaminski N
13. Zagorska A
14. Koziol-White C
15. Metcalf JP
16. Kim YH
17. Loebel C
18. Neptune E
19. Noel A
20. Raghu G
21. Sewald K
22. Sharma A
23. Suki B
24. Sperling A
25. Tatler A
26. Turner S
27. Rosas IO
28. van Ry P
29. Wille T
30. Randell SH
31. Pryhuber G
32. Rojas M
33. Bourke J
34. Königshoff M
Precision Cut Lung Slices: Emerging Tools for Preclinical and Translational Lung Research. An Official American Thoracic Society Workshop Report.; American journal of respiratory cell and molecular biology. 2024 Nov 05.
1. Ushakumary MG
2. Feng S
3. Bandyopadhyay G
4. Olson H
5. Weitz KK
6. Huyck HL
7. Poole C
8. Purkerson JM
9. Bhattacharya S
10. Ljungberg MC
11. Mariani TJ
12. Deutsch GH
13. Misra RS
14. Carson JP
15. Adkins JN
16. Pryhuber GS
17. Clair G
Cell Population-resolved Multi-Omics Atlas of the Developing Lung.; American journal of respiratory cell and molecular biology. 2024 Oct 24.
1. Veličković D
2. Purkerson J
3. Bhotika H
4. Huyck H
5. Clair G
6. Pryhuber GS
7. Anderton C
Integrating N -glycan and CODEX imaging reveal cell-specific protein glycosylation in healthy human lung.; bioRxiv : the preprint server for biology. 2024 Oct 08.
1. McLaughlin L
2. Zhang B
3. Sharma S
4. Knoten AL
5. Kaushal M
6. Purkerson JM
7. Huyck H
8. Pryhuber GS
9. Gaut JP
10. Jain S
Three Dimensional Multiscalar Neurovascular Nephron Connectivity Map of the Human Kidney Across the Lifespan.; bioRxiv : the preprint server for biology. 2024 Jul 30.
1. Liu A
2. Peng B
3. Pankajam AV
4. Duong TE
5. Pryhuber G
6. Scheuermann RH
7. Zhang Y
Discovery of optimal cell type classification marker genes from single cell RNA sequencing data.; bioRxiv : the preprint server for biology. 2024 Jun 26.
1. Börner K
2. Blood PD
3. Silverstein JC
4. Ruffalo M
5. Teichmann SA
6. Pryhuber G
7. Misra R
8. Purkerson J
9. Fan J
10. Hickey JW
11. Molla G
12. Xu C
13. Zhang Y
14. Weber G
15. Jain Y
16. Qaurooni D
17. Kong Y
18. Bueckle A
19. Herr BW
Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage.; bioRxiv : the preprint server for biology. 2024 May 22.
1. Stevens J
2. Culberson E
3. Kinder J
4. Ramiriqui A
5. Gray J
6. Bonfield M
7. Shao TY
8. Al Gharabieh F
9. Peterson L
10. Steinmeyer S
11. Zacharias W
12. Pryhuber G
13. Paul O
14. Sengupta S
15. Alenghat T
16. Way SS
17. Deshmukh H
Microbiota-derived inosine programs protective CD8 + T cell responses against influenza in newborns.; bioRxiv : the preprint server for biology. 2024 Apr 13.
1. Bandyopadhyay G
2. Jehrio MG
3. Baker C
4. Bhattacharya S
5. Misra RS
6. Huyck HL
7. Chu CY
8. Myers JR
9. Ashton J
10. Polter S
11. Cochran M
12. Bushnell T
13. Dutra J
14. Katzman PJ
15. Deutsch GH
16. Mariani TJ
17. Pryhuber GS
Bulk RNA Sequencing of Human Pediatric Lung Cell Populations Reveals Unique Transcriptomic Signature Associated with Post-natal Pulmonary Development.; American journal of physiology. Lung cellular and molecular physiology. 2024 Mar 05.
1. Bhattacharya S
2. Myers JA
3. Baker C
4. Guo M
5. Danopoulos S
6. Myers JR
7. Bandyopadhyay G
8. Romas ST
9. Huyck HL
10. Misra RS
11. Dutra J
12. Holden-Wiltse J
13. McDavid AN
14. Ashton JM
15. Al Alam D
16. Potter SS
17. Whitsett JA
18. Xu Y
19. Pryhuber GS
20. Mariani TJ
Single-Cell Transcriptomic Profiling Identifies Molecular Phenotypes of Newborn Human Lung Cells.; Genes; Vol 15(3). 2024 Feb 26.
1. Rosen-Carole CB
2. Greenman S
3. Wang H
4. Sonawane S
5. Misra R
6. O'Connor T
7. Jarvinen-Seppo K
8. and CD
9. Young BE
Does maternal stress associate with premature milk cortisol, milk IgA and infant health: a cohort study; Frontiers in Nutrition, section Nutritional Immunology. 2024 Jan 01.
1. Guo M
2. Morley MP
3. Jiang C
4. Wu Y
5. Li G
6. Du Y
7. Zhao S
8. Wagner A
9. Cakar AC
10. Kouril M
11. Jin K
12. Gaddis N
13. Kitzmiller JA
14. Stewart K
15. Basil MC
16. Lin SM
17. Ying Y
18. Babu A
19. Wikenheiser-Brokamp KA
20. Mun KS
21. Naren AP
22. Clair G
23. Adkins JN
24. Pryhuber GS
25. Misra RS
26. Aronow BJ
27. Tickle TL
28. Salomonis N
29. Sun X
30. Morrisey EE
31. Whitsett JA
32. Xu Y
Guided construction of single cell reference for human and mouse lung.; Nature communications; Vol 14(1), pp. 4566. 2023 Jul 29.
1. Dylag AM
2. Misra RS
3. Bandyopadhyay G
4. Poole C
5. Huyck HL
6. Jehrio MG
7. Haak J
8. Deutsch GH
9. Dvorak C
10. Olson HM
11. Paurus V
12. Katzman P
13. Woo J
14. Purkerson JM
15. Adkins JN
16. Mariani TJ
17. Clair GC
18. Pryhuber GS
New Insights into the Natural History of Bronchopulmonary Dysplasia from Proteomics and Multiplexed Immunohistochemistry.; American journal of physiology. Lung cellular and molecular physiology. 2023 Jul 25.
1. Quardokus EM
2. Saunders DC
3. McDonough E
4. Hickey JW
5. Werlein C
6. Surrette C
7. Rajbhandari P
8. Casals AM
9. Tian H
10. Lowery L
11. Neumann EK
12. Björklund F
13. Neelakantan TV
14. Croteau J
15. Wiblin AE
16. Fisher J
17. Livengood AJ
18. Dowell KG
19. Silverstein JC
20. Spraggins JM
21. Pryhuber GS
22. Deutsch G
23. Ginty F
24. Nolan GP
25. Melov S
26. Jonigk D
27. Caldwell MA
28. Vlachos IS
29. Muller W
30. Gehlenborg N
31. Stockwell BR
32. Lundberg E
33. Snyder MP
34. Germain RN
35. Camarillo JM
36. Kelleher NL
37. Börner K
38. Radtke AJ
Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging.; Nature methods. 2023 Jul 19.
1. Jain S
2. Pei L
3. Spraggins JM
4. Angelo M
5. Carson JP
6. Gehlenborg N
7. Ginty F
8. Gonçalves JP
9. Hagood JS
10. Hickey JW
11. Kelleher NL
12. Laurent LC
13. Lin S
14. Lin Y
15. Liu H
16. Naba A
17. Nakayasu ES
18. Qian WJ
19. Radtke A
20. Robson P
21. Stockwell BR
22. Van de Plas R
23. Vlachos IS
24. Zhou M
25. Börner K
26. Snyder MP
Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP).; Nature cell biology. 2023 Jul 19.
1. Osborn RM
2. Leach J
3. Zanche M
4. Ashton JM
5. Chu C
6. Thakar J
7. Dewhurst S
8. Rosenberger S
9. Pavelka M
10. Pryhuber GS
11. Mariani TJ
12. Anderson CS
Preparation of noninfectious scRNAseq samples from SARS-CoV-2-infected epithelial cells.; PloS one; Vol 18(2), pp. e0281898. 2023 Feb 24.
1. Groves AM
2. Misra R
3. Clair G
4. Hernady E
5. Olson H
6. Orton D
7. Finkelstein J
8. Marples B
9. Johnston CJ
Influence of the irradiated pulmonary microenvironment on macrophage and T cell dynamics.; Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology. 2023 Feb 20.
1. Groves AM
2. Misra R
3. Clair G
4. Hernady E
5. Olson H
6. Orton D
7. Finkelstein J
8. Marples B
9. Johnston CJ
Influence of the irradiated pulmonary microenvironment on macrophage and T cell dynamics; Radiotherapy and Oncology. 2023 Jan 01.
1. Zanini F
2. Che X
3. Knutsen C
4. Liu M
5. Suresh NE
6. Domingo-Gonzalez R
7. Dou SH
8. Zhang D
9. Pryhuber GS
10. Jones RC
11. Quake SR
12. Cornfield DN
13. Alvira CM
Developmental diversity and unique sensitivity to injury of lung endothelial subtypes during postnatal growth.; iScience; Vol 26(3), pp. 106097. 2023 Jan 31.
1. Hirani DV
2. Thielen F
3. Mansouri S
4. Danopoulos S
5. Vohlen C
6. Haznedar-Karakaya P
7. Mohr J
8. Wilke R
9. Selle J
10. Grosch T
11. Mizik I
12. Odenthal M
13. Alvira CM
14. Kuiper-Makris C
15. Pryhuber GS
16. Pallasch C
17. van Koningsbruggen-Rietschel S
18. Al-Alam D
19. Seeger W
20. Savai R
21. Dötsch J
22. Alejandre Alcazar MA
CXCL10 deficiency limits macrophage infiltration, preserves lung matrix, and enables lung growth in bronchopulmonary dysplasia.; Inflammation and regeneration; Vol 43(1), pp. 52. 2023 Jan 24.
1. Chu CY
2. Kim SY
3. Pryhuber GS
4. Mariani TJ
5. McGraw MD
Single Cell Resolution of Human Airway Epithelial Cells Exposed to Bronchiolitis Obliterans - Associated Chemicals.; American journal of physiology. Lung cellular and molecular physiology. 2023 Jan 12.
1. McDavid A
2. Laniewski N
3. Grier A
4. Gill AL
5. Kessler HA
6. Huyck H
7. Carbonell E
8. Holden-Wiltse J
9. Bandyopadhyay S
10. Carnahan J
11. Dylag AM
12. Topham DJ
13. Falsey AR
14. Caserta MT
15. Pryhuber GS
16. Gill SR
17. Scheible KM
Aberrant newborn T cell and microbiota developmental trajectories predict respiratory compromise during infancy.; iScience; Vol 25(4). 2022 Apr 15.
1. Xu X
2. Jin K
3. Bais AS
4. Zhu W
5. Yagi H
6. Feinstein TN
7. Nguyen PK
8. Criscione JD
9. Liu X
10. Beutner G
11. Karunakaran KB
12. Rao KS
13. He H
14. Adams P
15. Kuo CK
16. Kostka D
17. Pryhuber GS
18. Shiva S
19. Ganapathiraju MK
20. Porter GA
21. Lin JI
22. Aronow B
23. Lo CW
Uncompensated mitochondrial oxidative stress underlies heart failure in an iPSC-derived model of congenital heart disease.; Cell stem cell. 2022 Apr 07.
1. Xu J
2. Xu L
3. Sui P
4. Chen J
5. Moya EA
6. Hume P
7. Janssen WJ
8. Duran JM
9. Thistlethwaite P
10. Carlin A
11. Gulleman P
12. Banaschewski B
13. Goldy MK
14. Yuan JX
15. Malhotra A
16. Pryhuber G
17. Crotty-Alexander L
18. Deutsch G
19. Young LR
20. Sun X
Excess neuropeptides in lung signal through endothelial cells to impair gas exchange.; Developmental cell. 2022 Mar 11.
1. Gaddis N
2. Fortriede J
3. Guo M
4. Bardes EE
5. Kouril M
6. Tabar S
7. Burns K
8. Ardini-Poleske ME
9. Loos S
10. Schnell D
11. Jin K
12. Iyer B
13. Du Y
14. Huo BX
15. Bhattacharjee A
16. Korte J
17. Munshi R
18. Smith V
19. Herbst A
20. Kitzmiller JA
21. Clair GC
22. Carson JP
23. Adkins J
24. Morrisey EE
25. Pryhuber GS
26. Misra R
27. Whitsett JA
28. Sun X
29. Heathorn T
30. Paten B
31. Prasath VBS
32. Xu Y
33. Tickle T
34. Aronow BJ
35. Salomonis N
LungMAP Portal Ecosystem: Systems-Level Exploration of the Lung.; American journal of respiratory cell and molecular biology. 2022 Jan 22.
1. Yee M
2. McDavid AN
3. Cohen ED
4. Huyck HL
5. Poole C
6. Altman BJ
7. Maniscalco WM
8. Deutsch GH
9. Pryhuber GS
10. O'Reilly MA
Neonatal Hyperoxia Activates ATF4 to Stimulate Folate Metabolism and AT2 Cell Proliferation.; American journal of respiratory cell and molecular biology. 2022 Jan 19.
1. Lukowski JK
2. Olson H
3. Velickovic M
4. Wang J
5. Kyle JE
6. Kim YM
7. Williams SM
8. Zhu Y
9. Huyck HL
10. McGraw MD
11. Poole C
12. Rogers L
13. Misra R
14. Alexandrov T
15. Ansong C
16. Pryhuber GS
17. Clair G
18. Adkins JN
19. Carson JP
20. Anderton CR
An optimized approach and inflation media for obtaining complimentary mass spectrometry-based omics data from human lung tissue.; Frontiers in molecular biosciences; Vol 9, pp. 1022775. 2022 Jan 16.
1. Sun X
2. Perl AK
3. Li R
4. Bell SM
5. Sajti E
6. Kalinichenko VV
7. Kalin TV
8. Misra RS
9. Deshmukh H
10. Clair G
11. Kyle J
12. Crotty Alexander LE
13. Silva JM
14. Kitzmiller JA
15. Wikenheiser-Brokamp KA
16. Deutsch G
17. Guo M
18. Du Y
19. Morley MP
20. Valdez MJ
21. Yu HV
22. Jin K
23. Bardes EE
24. Zepp JA
25. Neithamer T
26. Basil MC
27. Zacharias WJ
28. Verheyden J
29. Young R
30. Bandyopadhyay G
31. Lin S
32. Ansong C
33. Adkins J
34. Salomonis N
35. Aronow BJ
36. Xu Y
37. Pryhuber G
38. Whitsett J
39. Morrisey EE
A census of the lung: CellCards from LungMAP.; Developmental cell. 2021 Dec 20.
1. House EL
2. Kim SY
3. Johnston CJ
4. Groves AM
5. Hernady E
6. Misra RS
7. McGraw MD
Diacetyl Vapor Inhalation Induces Mixed, Granulocytic Lung Inflammation with Increased CD4+CD25+ T Cells in the Rat.; Toxics; Vol 9(12). 2021 Dec 20.
1. House EL
2. Kim S
3. Johnston CJ
4. Groves AM
5. Hernady E
6. Misra RS
7. McGraw MD
Diacetyl Vapor Inhalation Induces Mixed, Granulocytic Lung Inflammation with Increased CD4+CD25+ T Cells in the Rat; Toxics. 2021 Jan 01.
1. Clair G
2. Bramer LM
3. Misra R
4. McGraw MD
5. Bhattacharya S
6. Kitzmiller JA
7. Feng S
8. Danna VG
9. Bandyopadhyay G
10. Bhotika H
11. Huyck HL
12. Deutsch GH
13. Mariani TJ
14. Carson J
15. Whitsett JA
16. Pryhuber GS
17. Adkins JN
18. Ansong C
Proteomic Analysis of Human Lung Development.; American journal of respiratory and critical care medicine. 2021 Nov 09.
1. Wang S
2. Zhu G
3. Jiang D
4. Rhen J
5. Li X
6. Liu H
7. Lyu Y
8. Tsai P
9. Rose Y
10. Nguyen T
11. White RJ
12. Pryhuber GS
13. Mariani TJ
14. Li C
15. Mohan A
16. Xu Y
17. Pang J
Reduced Notch1 Cleavage Promotes the Development of Pulmonary Hypertension.; Hypertension (Dallas, Tex. : 1979). 2021 Nov 05.
1. Börner K
2. Teichmann SA
3. Quardokus EM
4. Gee JC
5. Browne K
6. Osumi-Sutherland D
7. Herr BW
8. Bueckle A
9. Paul H
10. Haniffa M
11. Jardine L
12. Bernard A
13. Ding SL
14. Miller JA
15. Lin S
16. Halushka MK
17. Boppana A
18. Longacre TA
19. Hickey J
20. Lin Y
21. Valerius MT
22. He Y
23. Pryhuber G
24. Sun X
25. Jorgensen M
26. Radtke AJ
27. Wasserfall C
28. Ginty F
29. Ho J
30. Sunshine J
31. Beuschel RT
32. Brusko M
33. Lee S
34. Malhotra R
35. Jain S
36. Weber G
Anatomical structures, cell types and biomarkers of the Human Reference Atlas.; Nature cell biology; Vol 23(11). 2021 Nov.
1. Hirani D
2. Alvira CM
3. Danopoulos S
4. Milla C
5. Donato M
6. Tian L
7. Mohr J
8. Dinger K
9. Vohlen C
10. Selle J
11. Koningsbruggen-Rietschel SV
12. Barbarino V
13. Pallasch C
14. Rose-John S
15. Odenthal M
16. Pryhuber GS
17. Mansouri S
18. Savai R
19. Seeger W
20. Khatri P
21. Al Alam D
22. Dötsch J
23. Alejandre Alcazar MA
Macrophage-derived IL-6 trans-signaling as a novel target in the pathogenesis of bronchopulmonary dysplasia.; The European respiratory journal. 2021 Aug 26.
1. Dylag AM
2. Haak J
3. Warren R
4. Yee M
5. Pryhuber GS
6. O'Reilly MA
Low Dose Hyperoxia Primes Airways for Fibrosis in Mice after Influenza A Infection.; American journal of physiology. Lung cellular and molecular physiology. 2021 Jul 29.
1. Lam LRW
2. Schilling K
3. Romas S
4. Misra R
5. Zhou Z
6. Caton JG
7. Zhang X
Electrospun core-shell nanofibers with encapsulated enamel matrix derivative for guided periodontal tissue regeneration.; Dental materials journal. 2021 Jun 12.
1. Ha AW
2. Bai T
3. Ebenezer DL
4. Sethi T
5. Sudhadevi T
6. Mangio LA
7. Garzon S
8. Pryhuber GS
9. Natarajan V
10. Harijith A
Sphingosine kinase 1 regulates lysyl oxidase through STAT3 in hyperoxia-mediated neonatal lung injury.; Thorax. 2021 Apr 21.
1. Muus C
2. Luecken MD
3. Eraslan G
4. Sikkema L
5. Waghray A
6. Heimberg G
7. Kobayashi Y
8. Vaishnav ED
9. Subramanian A
10. Smillie C
11. Jagadeesh KA
12. Duong ET
13. Fiskin E
14. Triglia ET
15. Ansari M
16. Cai P
17. Lin B
18. Buchanan J
19. Chen S
20. Shu J
21. Haber AL
22. Chung H
23. Montoro DT
24. Adams T
25. Aliee H
26. Allon SJ
27. Andrusivova Z
28. Angelidis I
29. Ashenberg O
30. Bassler K
31. Bécavin C
32. Benhar I
33. Bergenstråhle J
34. Bergenstråhle L
35. Bolt L
36. Braun E
37. Bui LT
38. Callori S
39. Chaffin M
40. Chichelnitskiy E
41. Chiou J
42. Conlon TM
43. Cuoco MS
44. Cuomo ASE
45. Deprez M
46. Duclos G
47. Fine D
48. Fischer DS
49. Ghazanfar S
50. Gillich A
51. Giotti B
52. Gould J
53. Guo M
54. Gutierrez AJ
55. Habermann AC
56. Harvey T
57. He P
58. Hou X
59. Hu L
60. Hu Y
61. Jaiswal A
62. Ji L
63. Jiang P
64. Kapellos TS
65. Kuo CS
66. Larsson L
67. Leney-Greene MA
68. Lim K
69. Litviňuková M
70. Ludwig LS
71. Lukassen S
72. Luo W
73. Maatz H
74. Madissoon E
75. Mamanova L
76. Manakongtreecheep K
77. Leroy S
78. Mayr CH
79. Mbano IM
80. McAdams AM
81. Nabhan AN
82. Nyquist SK
83. Penland L
84. Poirion OB
85. Poli S
86. Qi C
87. Queen R
88. Reichart D
89. Rosas I
90. Schupp JC
91. Shea CV
92. Shi X
93. Sinha R
94. Sit RV
95. Slowikowski K
96. Slyper M
97. Smith NP
98. Sountoulidis A
99. Strunz M
100. Sullivan TB
101. Sun D
102. Talavera-López C
103. Tan P
104. Tantivit J
105. Travaglini KJ
106. Tucker NR
107. Vernon KA
108. Wadsworth MH
109. Waldman J
110. Wang X
111. Xu K
112. Yan W
113. Zhao W
114. Ziegler CGK
Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics.; Nature medicine. 2021 Mar 02.
1. Masci AM
2. White S
3. Neely B
4. Ardini-Polaske M
5. Hill CB
6. Misra RS
7. Aronow B
8. Gaddis N
9. Yang L
10. Wert SE
11. Palmer SM
12. Chan C
Ontology-guided segmentation and object identification for developmental mouse lung immunofluorescent images.; BMC bioinformatics; Vol 22(1). 2021 Feb 23.
1. Freeman A
2. Qiao L
3. Olave N
4. Rezonzew G
5. Gentle S
6. Halloran B
7. Pryhuber GS
8. Gaggar A
9. Tipple TE
10. Ambalavanan N
11. Lal CV
MicroRNA 219-5p inhibits alveolarization by reducing platelet derived growth factor receptor-alpha.; Respiratory research; Vol 22(1). 2021 Feb 17.
1. Kalininskiy A
2. Kittel J
3. Nacca NE
4. Misra RS
5. Croft DP
6. McGraw MD
E-cigarette exposures, respiratory tract infections, and impaired innate immunity: a narrative review.; Pediatric medicine (Hong Kong, China); Vol 4. 2021 Feb.
1. Cohen ED
2. Yee M
3. Porter GA
4. Ritzer EE
5. McDavid AN
6. Brookes PS
7. Pryhuber GS
8. O'Reilly MA
Neonatal hyperoxia inhibits proliferation and survival of atrial cardiomyocytes by suppressing fatty acid synthesis.; JCI insight. 2021 Jan 28.
1. Misra R
2. Mulligan JK
3. Rowland-Jones S
4. Zemlin M
Editorial: Autoimmunity and Chronic Inflammation in Early Life.; Frontiers in immunology; Vol 12. 2021.
1. Higano NS
2. Thomen RP
3. Quirk JD
4. Huyck HL
5. Hahn AD
6. Fain SB
7. Pryhuber GS
8. Woods JC
Alveolar Airspace Size in Healthy and Diseased Infant Lungs Measured via Hyperpolarized 3He Gas Diffusion Magnetic Resonance Imaging.; Neonatology. 2020 Nov 11.
1. Wang A
2. Chiou J
3. Poirion OB
4. Buchanan J
5. Valdez MJ
6. Verheyden JM
7. Hou X
8. Kudtarkar P
9. Narendra S
10. Newsome JM
11. Guo M
12. Faddah DA
13. Zhang K
14. Young RE
15. Barr J
16. Sajti E
17. Misra R
18. Huyck H
19. Rogers L
20. Poole C
21. Whitsett JA
22. Pryhuber G
23. Xu Y
24. Gaulton KJ
25. Preissl S
26. Sun X
Single cell multiomic profiling of human lung reveals cell type-specific and age-dynamic control of SARS-CoV2 host genes.; eLife; Vol 9. 2020 Nov 09.
1. Chu CY
2. Qiu X
3. McCall MN
4. Wang L
5. Corbett A
6. Holden-Wiltse J
7. Slaunwhite C
8. Grier A
9. Gill SR
10. Pryhuber GS
11. Falsey AR
12. Topham DJ
13. Caserta MT
14. Walsh EE
15. Mariani TJ
Airway gene expression correlates of RSV disease severity and microbiome composition in infants.; The Journal of infectious diseases. 2020 Sep 14.
1. Dylag AM
2. Kopin HG
3. O'Reilly MA
4. Wang H
5. Davis SD
6. Ren CL
7. Pryhuber GS
Early Neonatal Oxygen Exposure Predicts Pulmonary Morbidity and Functional Deficits at 1 Year.; The Journal of pediatrics; Vol 223. 2020 Aug.
1. McDavid A
2. Corbett AM
3. Dutra JL
4. Straw AG
5. Topham DJ
6. Pryhuber GS
7. Caserta MT
8. Gill SR
9. Scheible KM
10. Holden-Wiltse J
Eight practices for data management to enable team data science.; Journal of clinical and translational science; Vol 5(1). 2020 Jun 23.
1. Shah D
2. Sandhu K
3. Das P
4. Aghai ZH
5. Andersson S
6. Pryhuber G
7. Bhandari V
miR-184 mediates hyperoxia-induced injury by targeting cell death and angiogenesis signalling pathways in the developing lung.; The European respiratory journal. 2020 May 26.
1. Voynow JA
2. Fisher K
3. Sunday ME
4. Cotten CM
5. Hamvas A
6. Hendricks-Muñoz KD
7. Poindexter BB
8. Pryhuber GS
9. Ren CL
10. Ryan RM
11. Sharp JK
12. Young SP
13. Zhang H
14. Greenberg RG
15. Herring AH
16. Davis SD
Urine gastrin-releasing peptide in the first week correlates with bronchopulmonary dysplasia and post-prematurity respiratory disease.; Pediatric pulmonology; Vol 55(4). 2020 Apr.
1. Li C
2. Smith SM
3. Peinado N
4. Gao F
5. Li W
6. Lee MK
7. Zhou B
8. Bellusci S
9. Pryhuber GS
10. Ho HH
11. Borok Z
12. Minoo P
WNT5a-ROR Signaling Is Essential for Alveologenesis.; Cells; Vol 9(2). 2020 Feb 07.
1. Bhattacharya S
2. Mereness JA
3. Baran AM
4. Misra RS
5. Peterson DR
6. Ryan RM
7. Reynolds AM
8. Pryhuber GS
9. Mariani TJ
Lymphocyte-Specific Biomarkers Associated With Preterm Birth and Bronchopulmonary Dysplasia.; Frontiers in immunology; Vol 11. 2020.
1. Myti D
2. Gunjak M
3. Casado F
4. Khaghani Raziabad S
5. Nardiello C
6. Vadász I
7. Herold S
8. Pryhuber G
9. Seeger W
10. Morty RE
Elevated FiO2 increases SARS-CoV-2 co-receptor expression in respiratory tract epithelium.; American journal of physiology. Lung cellular and molecular physiology; Vol 319(4). 2020 Jan 01.
1. Misra RS
2. Nayak JL
The Importance of Vaccinating Children and Pregnant Women against Influenza Virus Infection.; Pathogens (Basel, Switzerland); Vol 8(4). 2019 Nov 26.
1. Anderson CS
2. Chu CY
3. Wang Q
4. Mereness JA
5. Ren Y
6. Donlon K
7. Bhattacharya S
8. Misra RS
9. Walsh EE
10. Pryhuber GS
11. Mariani TJ
CX3CR1 as a respiratory syncytial virus receptor in pediatric human lung.; Pediatric research. 2019 Nov 14.
1. Steiner LA
2. Getman M
3. Schiralli Lester GM
4. Iqbal MA
5. Katzman P
6. Szafranski P
7. Stankiewicz P
8. Bhattacharya S
9. Mariani T
10. Pryhuber G
11. Lin X
12. Young JL
13. Dean DA
14. Scheible K
Disruption of normal patterns of FOXF1 expression in a lethal disorder of lung development.; Journal of medical genetics. 2019 Oct 29.
1. Li C
2. Lee MK
3. Gao F
4. Webster S
5. Di H
6. Duan J
7. Yang CY
8. Bhopal N
9. Peinado N
10. Pryhuber G
11. Smith SM
12. Borok Z
13. Bellusci S
14. Minoo P
Secondary crest myofibroblast PDGFRα controls the elastogenesis pathway via a secondary tier of signaling networks during alveologenesis.; Development (Cambridge, England); Vol 146(15). 2019 Aug 09.
1. Caserta MT
2. Yang H
3. Bandyopadhyay S
4. Qiu X
5. Gill SR
6. Java J
7. McDavid A
8. Falsey AR
9. Topham DJ
10. Holden-Wiltse J
11. Scheible K
12. Pryhuber G
Measuring the Severity of Respiratory Illness in the First 2 Years of Life in Preterm and Term Infants.; The Journal of pediatrics. 2019 Jul 31.
1. Du Y
2. Clair GC
3. Al Alam D
4. Danopoulos S
5. Schnell D
6. Kitzmiller JA
7. Misra RS
8. Bhattacharya S
9. Warburton D
10. Mariani TJ
11. Pryhuber GS
12. Whitsett JA
13. Ansong C
14. Xu Y
Integration of transcriptomic and proteomic data identifies biological functions in cell populations from human infant lung.; American journal of physiology. Lung cellular and molecular physiology. 2019 Jul 03.
1. Stone SL
2. Peel JN
3. Scharer CD
4. Risley CA
5. Chisolm DA
6. Schultz MD
7. Yu B
8. Ballesteros-Tato A
9. Wojciechowski W
10. Mousseau B
11. Misra RS
12. Hanidu A
13. Jiang H
14. Qi Z
15. Boss JM
16. Randall TD
17. Brodeur SR
18. Goldrath AW
19. Weinmann AS
20. Rosenberg AF
21. Lund FE
T-bet Transcription Factor Promotes Antibody-Secreting Cell Differentiation by Limiting the Inflammatory Effects of IFN-γ on B Cells.; Immunity; Vol 50(5). 2019 May 21.
1. Jiang Y
2. Luo Y
3. Tang Y
4. Moats R
5. Warburton D
6. Zhou S
7. Lou J
8. Pryhuber GS
9. Shi W
10. Wang LL
Alteration of cystic airway mesenchyme in congenital pulmonary airway malformation.; Scientific reports; Vol 9(1). 2019 Mar 28.
1. Wang Q
2. Bhattacharya S
3. Mereness JA
4. Anderson C
5. Lillis JA
6. Misra RS
7. Romas S
8. Huyck H
9. Howell A
10. Bandyopadhyay G
11. Donlon K
12. Myers JR
13. Ashton J
14. Pryhuber GS
15. Mariani TJ
A novel in vitro model of primary human pediatric lung epithelial cells.; Pediatric research. 2019 Feb 18.
1. Ali M
2. Heyob K
3. Tipple TE
4. Pryhuber GS
5. Rogers LK
Alterations in VASP phosphorylation and profilin1 and cofilin1 expression in hyperoxic lung injury and BPD.; Respiratory research; Vol 19(1). 2018 Nov 21.
1. Grier A
2. McDavid A
3. Wang B
4. Qiu X
5. Java J
6. Bandyopadhyay S
7. Yang H
8. Holden-Wiltse J
9. Kessler HA
10. Gill AL
11. Huyck H
12. Falsey AR
13. Topham DJ
14. Scheible KM
15. Caserta MT
16. Pryhuber GS
17. Gill SR
Neonatal gut and respiratory microbiota: coordinated development through time and space.; Microbiome; Vol 6(1). 2018 Oct 26.
1. Syed MA
2. Shah D
3. Das P
4. Andersson S
5. Pryhuber G
6. Bhandari V
TREM-1 Attenuates RIPK3 Mediated Necroptosis in Hyperoxia Induced Lung Injury in Neonatal Mice.; American journal of respiratory cell and molecular biology. 2018 Oct 03.
1. Kyle JE
2. Clair G
3. Bandyopadhyay G
4. Misra RS
5. Zink EM
6. Bloodsworth KJ
7. Shukla AK
8. Du Y
9. Lillis J
10. Myers JR
11. Ashton J
12. Bushnell T
13. Cochran M
14. Deutsch G
15. Baker ES
16. Carson JP
17. Mariani TJ
18. Xu Y
19. Whitsett JA
20. Pryhuber G
21. Ansong C
Cell type-resolved human lung lipidome reveals cellular cooperation in lung function.; Scientific reports; Vol 8(1). 2018 Sep 07.
1. Bandyopadhyay G
2. Huyck HL
3. Misra RS
4. Bhattacharya S
5. Wang Q
6. Mereness J
7. Lillis JA
8. Myers JR
9. Ashton J
10. Bushnell T
11. Cochran M
12. Holden-Wiltse J
13. Katzman P
14. Deutsch GH
15. Whitsett JA
16. Xu Y
17. Mariani TJ
18. Pryhuber GS
Dissociation, Cellular Isolation and Initial Molecular Characterization of Neonatal and Pediatric Human Lung Tissues.; American journal of physiology. Lung cellular and molecular physiology. 2018 Jul 05.
1. Pryhuber GS
Renewed Promise of Non-ionizing Radiation Imaging for Chronic Lung Disease in Preterm Infants.; American journal of respiratory and critical care medicine. 2018 Jun 26.
1. Luo Y
2. Li N
3. Chen H
4. Fernandez GE
5. Warburton D
6. Moats R
7. Mecham RP
8. Krenitsky D
9. Pryhuber GS
10. Shi W
Spatial and temporal changes in extracellular elastin and laminin distribution during lung alveolar development.; Scientific reports; Vol 8(1). 2018 May 29.
1. Zhu Y
2. Clair G
3. Chrisler W
4. Shen Y
5. Zhao R
6. Shukla A
7. Moore R
8. Misra R
9. Pryhuber G
10. Smith R
11. Ansong C
12. Kelly RT
Proteomic analysis of single mammalian cells enabled by microfluidic nanodroplet sample preparation and ultrasensitive nanoLC-MS.; Angewandte Chemie (International ed. in English). 2018 May 24.
1. Scheible KM
2. Emo J
3. Laniewski N
4. Baran AM
5. Peterson DR
6. Holden-Wiltse J
7. Bandyopadhyay S
8. Straw AG
9. Huyck H
10. Ashton JM
11. Tripi KS
12. Arul K
13. Werner E
14. Scalise T
15. Maffett D
16. Caserta M
17. Ryan RM
18. Reynolds AM
19. Ren CL
20. Topham DJ
21. Mariani TJ
22. Pryhuber GS
T cell developmental arrest in former premature infants increases risk of respiratory morbidity later in infancy.; JCI insight; Vol 3(4). 2018 Feb 22.
1. Mereness JA
2. Bhattacharya S
3. Wang Q
4. Ren Y
5. Pryhuber GS
6. Mariani TJ
Type VI collagen promotes lung epithelial cell spreading and wound-closure.; PloS one; Vol 13(12). 2018.
1. Grier A
2. Qiu X
3. Bandyopadhyay S
4. Holden-Wiltse J
5. Kessler HA
6. Gill AL
7. Hamilton B
8. Huyck H
9. Misra S
10. Mariani TJ
11. Ryan RM
12. Scholer L
13. Scheible KM
14. Lee YH
15. Caserta MT
16. Pryhuber GS
17. Gill SR
Impact of prematurity and nutrition on the developing gut microbiome and preterm infant growth.; Microbiome; Vol 5(1). 2017 Dec 11.
1. Syed M
2. Das P
3. Pawar A
4. Aghai ZH
5. Kaskinen A
6. Zhuang ZW
7. Ambalavanan N
8. Pryhuber G
9. Andersson S
10. Bhandari V
Hyperoxia causes miR-34a-mediated injury via angiopoietin-1 in neonatal lungs.; Nature communications; Vol 8(1). 2017 Oct 27.
1. D'Angio CT
2. Wyman CP
3. Misra RS
4. Halliley JL
5. Wang H
6. Hunn JE
7. Fallone CM
8. Lee FE
Plasma cell and serum antibody responses to influenza vaccine in preterm and full-term infants.; Vaccine. 2017 Aug 11.
1. Domm W
2. Yee M
3. Misra RS
4. Gelein R
5. Nogales A
6. Martinez Sobrido L
7. O'Reilly MA
Oxygen-dependent changes in lung development do not affect epithelial infection with influenza A virus.; American journal of physiology. Lung cellular and molecular physiology. 2017 Aug 10.
1. Ardini-Poleske ME
2. Clark RF
3. Ansong C
4. Carson JP
5. Corley RA
6. Deutsch GH
7. Hagood JS
8. Kaminski N
9. Mariani TJ
10. Potter SS
11. Pryhuber GS
12. Warburton D
13. Whitsett JA
14. Palmer SM
15. Ambalavanan N
16. LungMAP Consortium T
LungMAP: The Molecular Atlas of Lung Development Program.; American journal of physiology. Lung cellular and molecular physiology. 2017 Aug 10.
1. D'Angio CT
2. Wang H
3. Hunn JE
4. Pryhuber GS
5. Chess PR
6. Lakshminrusimha S
Permission form synopses to improve parents' understanding of research: a randomized trial.; Journal of perinatology : official journal of the California Perinatal Association; Vol 37(6). 2017 Jun.
1. Durrani-Kolarik S
2. Pool CA
3. Gray A
4. Heyob KM
5. Cismowski MJ
6. Pryhuber GS
7. Lee LJ
8. Yang Z
9. Tipple TE
10. Rogers LK
Mir-29b Supplementation Decreases Expression of Matrix Proteins and Improves Alveolarization in Mice Exposed to Maternal Inflammation and Neonatal Hyperoxia.; American journal of physiology. Lung cellular and molecular physiology. 2017 May 04.
1. Oleksyn D
2. Zhao J
3. Vosoughi A
4. Zhao JC
5. Misra R
6. Pentland AP
7. Ryan D
8. Anolik J
9. Ritchlin C
10. Looney J
11. Anandarajah AP
12. Schwartz G
13. Calvi LM
14. Georger M
15. Mohan C
16. Sanz I
17. Chen L
PKK deficiency in B cells prevents lupus development in Sle lupus mice.; Immunology letters; Vol 185. 2017 Mar 06.
1. Caserta MT
2. Yang H
3. Gill SR
4. Holden-Wiltse J
5. Pryhuber G
Viral Respiratory Infections in Preterm Infants during and after Hospitalization.; The Journal of pediatrics; Vol 182. 2017 Mar.
1. Du Y
2. Kitzmiller JA
3. Sridharan A
4. Perl AK
5. Bridges JP
6. Misra RS
7. Pryhuber GS
8. Mariani TJ
9. Bhattacharya S
10. Guo M
11. Potter SS
12. Dexheimer P
13. Aronow B
14. Jobe AH
15. Whitsett JA
16. Xu Y
Lung Gene Expression Analysis (LGEA): an integrative web portal for comprehensive gene expression data analysis in lung development.; Thorax. 2017 Jan 09.
1. Groves AM
2. Johnston CJ
3. Misra RS
4. Williams JP
5. Finkelstein JN
Effects of IL-4 on Pulmonary Fibrosis and the Accumulation and Phenotype of Macrophage Subpopulations Following Thoracic Irradiation.; International journal of radiation biology. 2016 Aug 19.
1. Misra RS
2. Bhattacharya S
3. Huyck HL
4. Wang JE
5. Slaunwhite CG
6. Slaunwhite SL
7. Wightman TR
8. Secor-Socha S
9. Misra SK
10. Bushnell TP
11. Reynolds AM
12. Ryan RM
13. Quataert SA
14. Pryhuber GS
15. Mariani TJ
Flow-based sorting of neonatal lymphocyte populations for transcriptomics analysis.; Journal of immunological methods. 2016 Jul 18.
1. Angara S
2. Syed M
3. Das P
4. Janér C
5. Pryhuber G
6. Rahman A
7. Andersson S
8. Homer RJ
9. Bhandari V
Inhibition of RPTOR Prevents Hyperoxia-induced Lung Injury by Enhancing Autophagy and Reducing Apoptosis in Neonatal Mice.; American journal of respiratory cell and molecular biology. 2016 Jul 2.
1. Misra RS
The Microbiome, Antibiotics, and Health of the Pediatric Population.; EC microbiology; Vol 3(1). 2016 Mar.
1. Groves AM
2. Johnston CJ
3. Misra RS
4. Williams JP
5. Finkelstein JN
Whole-Lung Irradiation Results in Pulmonary Macrophage Alterations that are Subpopulation and Strain Specific.; Radiation research; Vol 184(6). 2015 Dec.
1. Scheible KM
2. Emo J
3. Yang H
4. Holden-Wiltse J
5. Straw A
6. Huyck H
7. Misra S
8. Topham DJ
9. Ryan RM
10. Reynolds AM
11. Mariani TJ
12. Pryhuber GS
Developmentally determined reduction in CD31 during gestation is associated with CD8+ T cell effector differentiation in preterm infants.; Clinical immunology (Orlando, Fla.); Vol 161(2). 2015 Dec.
1. Pryhuber GS
Postnatal Infections and Immunology Affecting Chronic Lung Disease of Prematurity.; Clinics in perinatology; Vol 42(4). 2015 Dec.
1. Kallapur SG
2. Pryhuber GS
Bronchopulmonary Dysplasia--The Search for Answers Continues.; Clinics in perinatology; Vol 42(4). 2015 Dec.
1. Rogers LK
2. Robbins M
3. Dakhlallah D
4. Yang Z
5. Lee LJ
6. Mikhail M
7. Nuovo G
8. Pryhuber GS
9. McGwin G
10. Marsh CB
11. Tipple TE
Attenuation of miR-17∼92 Cluster in Bronchopulmonary Dysplasia.; Annals of the American Thoracic Society; Vol 12(10). 2015 Oct.
1. Misra RS
2. Johnston CJ
3. Groves AM
4. DeDiego ML
5. St Martin J
6. Reed C
7. Hernady E
8. Miller JN
9. Love T
10. Finkelstein JN
11. Williams JP
Examining the Effects of External or Internal Radiation Exposure of Juvenile Mice on Late Morbidity after Infection with Influenza A.; Radiation research; Vol 184(1). 2015 Jul.
1. Misra R
2. Shah S
3. Fowell D
4. Wang H
5. Scheible K
6. Misra S
7. Huyck H
8. Wyman C
9. Ryan RM
10. Reynolds AM
11. Mariani T
12. Katzman PJ
13. Pryhuber GS
Preterm cord blood CD4⁺ T cells exhibit increased IL-6 production in chorioamnionitis and decreased CD4⁺ T cells in bronchopulmonary dysplasia.; Human immunology; Vol 76(5). 2015 May.
1. Maitre NL
2. Ballard RA
3. Ellenberg JH
4. Davis SD
5. Greenberg JM
6. Hamvas A
7. Pryhuber GS
Respiratory consequences of prematurity: evolution of a diagnosis and development of a comprehensive approach.; Journal of perinatology : official journal of the California Perinatal Association; Vol 35(5). 2015 May.
1. Pryhuber GS
2. Maitre NL
3. Ballard RA
4. Cifelli D
5. Davis SD
6. Ellenberg JH
7. Greenberg JM
8. Kemp J
9. Mariani TJ
10. Panitch H
11. Ren C
12. Shaw P
13. Taussig LM
14. Hamvas A
Prematurity and respiratory outcomes program (PROP): study protocol of a prospective multicenter study of respiratory outcomes of preterm infants in the United States.; BMC pediatrics; Vol 15. 2015.
1. Domm W
2. Misra RS
3. O'Reilly MA
Affect of Early Life Oxygen Exposure on Proper Lung Development and Response to Respiratory Viral Infections.; Frontiers in medicine; Vol 2. 2015.
1. Bozyk PD
2. Bentley JK
3. Popova AP
4. Anyanwu AC
5. Linn MD
6. Goldsmith AM
7. Pryhuber GS
8. Moore BB
9. Hershenson MB
Correction: Neonatal Periostin Knockout Mice Are Protected from Hyperoxia-Induced Alveolar Simplication.; PloS one; Vol 10(6). 2015.
1. Popova AP
2. Cui TX
3. Kaciroti N
4. Goldsmith AM
5. Linn MJ
6. Pryhuber GS
7. Hershenson MB
Tracheal Aspirate Levels of the Matricellular Protein SPARC Predict Development of Bronchopulmonary Dysplasia.; PloS one; Vol 10(12). 2015.
1. Dardas M
2. Gill SR
3. Grier A
4. Pryhuber GS
5. Gill AL
6. Lee YH
7. Guillet R
The impact of postnatal antibiotics on the preterm intestinal microbiome.; Pediatric research; Vol 76(2). 2014 Aug.