Pediatrics / Pryhuber Research Lab / Publications Publications Nguyen NDRosas LKhaliullin TJiang PHasanaj EOvando-Ricardez JABueno MRahman IPryhuber GSLi DMa QFinkel TKönigshoff MEickelberg ORojas MMora ALLugo-Martinez JBar-Joseph Z scDOT: optimal transport for mapping senescent cells in spatial transcriptomics.; Genome biology; Vol 25(1), pp. 288. 2024 Nov 08. Lehmann MKrishnan RSucre JKulkarni HSPineda RHAnderson CBanovich NEBehrsing HPDean CHHaak AGosens RKaminski NZagorska AKoziol-White CMetcalf JPKim YHLoebel CNeptune ENoel ARaghu GSewald KSharma ASuki BSperling ATatler ATurner SRosas IOvan Ry PWille TRandell SHPryhuber GRojas MBourke JKönigshoff M Precision Cut Lung Slices: Emerging Tools for Preclinical and Translational Lung Research. An Official American Thoracic Society Workshop Report.; American journal of respiratory cell and molecular biology. 2024 Nov 05. Ushakumary MGFeng SBandyopadhyay GOlson HWeitz KKHuyck HLPoole CPurkerson JMBhattacharya SLjungberg MCMariani TJDeutsch GHMisra RSCarson JPAdkins JNPryhuber GSClair G Cell Population-resolved Multi-Omics Atlas of the Developing Lung.; American journal of respiratory cell and molecular biology. 2024 Oct 24. Veličković DPurkerson JBhotika HHuyck HClair GPryhuber GSAnderton C Integrating N -glycan and CODEX imaging reveal cell-specific protein glycosylation in healthy human lung.; bioRxiv : the preprint server for biology. 2024 Oct 08. McLaughlin LZhang BSharma SKnoten ALKaushal MPurkerson JMHuyck HPryhuber GSGaut JPJain S Three Dimensional Multiscalar Neurovascular Nephron Connectivity Map of the Human Kidney Across the Lifespan.; bioRxiv : the preprint server for biology. 2024 Jul 30. Liu APeng BPankajam AVDuong TEPryhuber GScheuermann RHZhang Y Discovery of optimal cell type classification marker genes from single cell RNA sequencing data.; bioRxiv : the preprint server for biology. 2024 Jun 26. Börner KBlood PDSilverstein JCRuffalo MTeichmann SAPryhuber GMisra RPurkerson JFan JHickey JWMolla GXu CZhang YWeber GJain YQaurooni DKong YBueckle AHerr BW Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage.; bioRxiv : the preprint server for biology. 2024 May 22. Stevens JCulberson EKinder JRamiriqui AGray JBonfield MShao TYAl Gharabieh FPeterson LSteinmeyer SZacharias WPryhuber GPaul OSengupta SAlenghat TWay SSDeshmukh H Microbiota-derived inosine programs protective CD8 + T cell responses against influenza in newborns.; bioRxiv : the preprint server for biology. 2024 Apr 13. Bandyopadhyay GJehrio MGBaker CBhattacharya SMisra RSHuyck HLChu CYMyers JRAshton JPolter SCochran MBushnell TDutra JKatzman PJDeutsch GHMariani TJPryhuber GS Bulk RNA Sequencing of Human Pediatric Lung Cell Populations Reveals Unique Transcriptomic Signature Associated with Post-natal Pulmonary Development.; American journal of physiology. Lung cellular and molecular physiology. 2024 Mar 05. Bhattacharya SMyers JABaker CGuo MDanopoulos SMyers JRBandyopadhyay GRomas STHuyck HLMisra RSDutra JHolden-Wiltse JMcDavid ANAshton JMAl Alam DPotter SSWhitsett JAXu YPryhuber GSMariani TJ Single-Cell Transcriptomic Profiling Identifies Molecular Phenotypes of Newborn Human Lung Cells.; Genes; Vol 15(3). 2024 Feb 26. Rosen-Carole CBGreenman SWang HSonawane SMisra RO'Connor TJarvinen-Seppo Kand CDYoung BE Does maternal stress associate with premature milk cortisol, milk IgA and infant health: a cohort study; Frontiers in Nutrition, section Nutritional Immunology. 2024 Jan 01. Guo MMorley MPJiang CWu YLi GDu YZhao SWagner ACakar ACKouril MJin KGaddis NKitzmiller JAStewart KBasil MCLin SMYing YBabu AWikenheiser-Brokamp KAMun KSNaren APClair GAdkins JNPryhuber GSMisra RSAronow BJTickle TLSalomonis NSun XMorrisey EEWhitsett JAXu Y Guided construction of single cell reference for human and mouse lung.; Nature communications; Vol 14(1), pp. 4566. 2023 Jul 29. Dylag AMMisra RSBandyopadhyay GPoole CHuyck HLJehrio MGHaak JDeutsch GHDvorak COlson HMPaurus VKatzman PWoo JPurkerson JMAdkins JNMariani TJClair GCPryhuber GS New Insights into the Natural History of Bronchopulmonary Dysplasia from Proteomics and Multiplexed Immunohistochemistry.; American journal of physiology. Lung cellular and molecular physiology. 2023 Jul 25. Quardokus EMSaunders DCMcDonough EHickey JWWerlein CSurrette CRajbhandari PCasals AMTian HLowery LNeumann EKBjörklund FNeelakantan TVCroteau JWiblin AEFisher JLivengood AJDowell KGSilverstein JCSpraggins JMPryhuber GSDeutsch GGinty FNolan GPMelov SJonigk DCaldwell MAVlachos ISMuller WGehlenborg NStockwell BRLundberg ESnyder MPGermain RNCamarillo JMKelleher NLBörner KRadtke AJ Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging.; Nature methods. 2023 Jul 19. Jain SPei LSpraggins JMAngelo MCarson JPGehlenborg NGinty FGonçalves JPHagood JSHickey JWKelleher NLLaurent LCLin SLin YLiu HNaba ANakayasu ESQian WJRadtke ARobson PStockwell BRVan de Plas RVlachos ISZhou MBörner KSnyder MP Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP).; Nature cell biology. 2023 Jul 19. Osborn RMLeach JZanche MAshton JMChu CThakar JDewhurst SRosenberger SPavelka MPryhuber GSMariani TJAnderson CS Preparation of noninfectious scRNAseq samples from SARS-CoV-2-infected epithelial cells.; PloS one; Vol 18(2), pp. e0281898. 2023 Feb 24. Groves AMMisra RClair GHernady EOlson HOrton DFinkelstein JMarples BJohnston CJ Influence of the irradiated pulmonary microenvironment on macrophage and T cell dynamics.; Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology. 2023 Feb 20. Groves AMMisra RClair GHernady EOlson HOrton DFinkelstein JMarples BJohnston CJ Influence of the irradiated pulmonary microenvironment on macrophage and T cell dynamics; Radiotherapy and Oncology. 2023 Jan 01. Zanini FChe XKnutsen CLiu MSuresh NEDomingo-Gonzalez RDou SHZhang DPryhuber GSJones RCQuake SRCornfield DNAlvira CM Developmental diversity and unique sensitivity to injury of lung endothelial subtypes during postnatal growth.; iScience; Vol 26(3), pp. 106097. 2023 Jan 31. Hirani DVThielen FMansouri SDanopoulos SVohlen CHaznedar-Karakaya PMohr JWilke RSelle JGrosch TMizik IOdenthal MAlvira CMKuiper-Makris CPryhuber GSPallasch Cvan Koningsbruggen-Rietschel SAl-Alam DSeeger WSavai RDötsch JAlejandre Alcazar MA CXCL10 deficiency limits macrophage infiltration, preserves lung matrix, and enables lung growth in bronchopulmonary dysplasia.; Inflammation and regeneration; Vol 43(1), pp. 52. 2023 Jan 24. Chu CYKim SYPryhuber GSMariani TJMcGraw MD Single Cell Resolution of Human Airway Epithelial Cells Exposed to Bronchiolitis Obliterans - Associated Chemicals.; American journal of physiology. Lung cellular and molecular physiology. 2023 Jan 12. McDavid ALaniewski NGrier AGill ALKessler HAHuyck HCarbonell EHolden-Wiltse JBandyopadhyay SCarnahan JDylag AMTopham DJFalsey ARCaserta MTPryhuber GSGill SRScheible KM Aberrant newborn T cell and microbiota developmental trajectories predict respiratory compromise during infancy.; iScience; Vol 25(4). 2022 Apr 15. Xu XJin KBais ASZhu WYagi HFeinstein TNNguyen PKCriscione JDLiu XBeutner GKarunakaran KBRao KSHe HAdams PKuo CKKostka DPryhuber GSShiva SGanapathiraju MKPorter GALin JIAronow BLo CW Uncompensated mitochondrial oxidative stress underlies heart failure in an iPSC-derived model of congenital heart disease.; Cell stem cell. 2022 Apr 07. Xu JXu LSui PChen JMoya EAHume PJanssen WJDuran JMThistlethwaite PCarlin AGulleman PBanaschewski BGoldy MKYuan JXMalhotra APryhuber GCrotty-Alexander LDeutsch GYoung LRSun X Excess neuropeptides in lung signal through endothelial cells to impair gas exchange.; Developmental cell. 2022 Mar 11. Gaddis NFortriede JGuo MBardes EEKouril MTabar SBurns KArdini-Poleske MELoos SSchnell DJin KIyer BDu YHuo BXBhattacharjee AKorte JMunshi RSmith VHerbst AKitzmiller JAClair GCCarson JPAdkins JMorrisey EEPryhuber GSMisra RWhitsett JASun XHeathorn TPaten BPrasath VBSXu YTickle TAronow BJSalomonis N LungMAP Portal Ecosystem: Systems-Level Exploration of the Lung.; American journal of respiratory cell and molecular biology. 2022 Jan 22. Yee MMcDavid ANCohen EDHuyck HLPoole CAltman BJManiscalco WMDeutsch GHPryhuber GSO'Reilly MA Neonatal Hyperoxia Activates ATF4 to Stimulate Folate Metabolism and AT2 Cell Proliferation.; American journal of respiratory cell and molecular biology. 2022 Jan 19. Lukowski JKOlson HVelickovic MWang JKyle JEKim YMWilliams SMZhu YHuyck HLMcGraw MDPoole CRogers LMisra RAlexandrov TAnsong CPryhuber GSClair GAdkins JNCarson JPAnderton CR An optimized approach and inflation media for obtaining complimentary mass spectrometry-based omics data from human lung tissue.; Frontiers in molecular biosciences; Vol 9, pp. 1022775. 2022 Jan 16. Sun XPerl AKLi RBell SMSajti EKalinichenko VVKalin TVMisra RSDeshmukh HClair GKyle JCrotty Alexander LESilva JMKitzmiller JAWikenheiser-Brokamp KADeutsch GGuo MDu YMorley MPValdez MJYu HVJin KBardes EEZepp JANeithamer TBasil MCZacharias WJVerheyden JYoung RBandyopadhyay GLin SAnsong CAdkins JSalomonis NAronow BJXu YPryhuber GWhitsett JMorrisey EE A census of the lung: CellCards from LungMAP.; Developmental cell. 2021 Dec 20. House ELKim SYJohnston CJGroves AMHernady EMisra RSMcGraw MD Diacetyl Vapor Inhalation Induces Mixed, Granulocytic Lung Inflammation with Increased CD4+CD25+ T Cells in the Rat.; Toxics; Vol 9(12). 2021 Dec 20. House ELKim SJohnston CJGroves AMHernady EMisra RSMcGraw MD Diacetyl Vapor Inhalation Induces Mixed, Granulocytic Lung Inflammation with Increased CD4+CD25+ T Cells in the Rat; Toxics. 2021 Jan 01. Clair GBramer LMMisra RMcGraw MDBhattacharya SKitzmiller JAFeng SDanna VGBandyopadhyay GBhotika HHuyck HLDeutsch GHMariani TJCarson JWhitsett JAPryhuber GSAdkins JNAnsong C Proteomic Analysis of Human Lung Development.; American journal of respiratory and critical care medicine. 2021 Nov 09. Wang SZhu GJiang DRhen JLi XLiu HLyu YTsai PRose YNguyen TWhite RJPryhuber GSMariani TJLi CMohan AXu YPang J Reduced Notch1 Cleavage Promotes the Development of Pulmonary Hypertension.; Hypertension (Dallas, Tex. : 1979). 2021 Nov 05. Börner KTeichmann SAQuardokus EMGee JCBrowne KOsumi-Sutherland DHerr BWBueckle APaul HHaniffa MJardine LBernard ADing SLMiller JALin SHalushka MKBoppana ALongacre TAHickey JLin YValerius MTHe YPryhuber GSun XJorgensen MRadtke AJWasserfall CGinty FHo JSunshine JBeuschel RTBrusko MLee SMalhotra RJain SWeber G Anatomical structures, cell types and biomarkers of the Human Reference Atlas.; Nature cell biology; Vol 23(11). 2021 Nov. Hirani DAlvira CMDanopoulos SMilla CDonato MTian LMohr JDinger KVohlen CSelle JKoningsbruggen-Rietschel SVBarbarino VPallasch CRose-John SOdenthal MPryhuber GSMansouri SSavai RSeeger WKhatri PAl Alam DDötsch JAlejandre Alcazar MA Macrophage-derived IL-6 trans-signaling as a novel target in the pathogenesis of bronchopulmonary dysplasia.; The European respiratory journal. 2021 Aug 26. Dylag AMHaak JWarren RYee MPryhuber GSO'Reilly MA Low Dose Hyperoxia Primes Airways for Fibrosis in Mice after Influenza A Infection.; American journal of physiology. Lung cellular and molecular physiology. 2021 Jul 29. Lam LRWSchilling KRomas SMisra RZhou ZCaton JGZhang X Electrospun core-shell nanofibers with encapsulated enamel matrix derivative for guided periodontal tissue regeneration.; Dental materials journal. 2021 Jun 12. Ha AWBai TEbenezer DLSethi TSudhadevi TMangio LAGarzon SPryhuber GSNatarajan VHarijith A Sphingosine kinase 1 regulates lysyl oxidase through STAT3 in hyperoxia-mediated neonatal lung injury.; Thorax. 2021 Apr 21. Muus CLuecken MDEraslan GSikkema LWaghray AHeimberg GKobayashi YVaishnav EDSubramanian ASmillie CJagadeesh KADuong ETFiskin ETriglia ETAnsari MCai PLin BBuchanan JChen SShu JHaber ALChung HMontoro DTAdams TAliee HAllon SJAndrusivova ZAngelidis IAshenberg OBassler KBécavin CBenhar IBergenstråhle JBergenstråhle LBolt LBraun EBui LTCallori SChaffin MChichelnitskiy EChiou JConlon TMCuoco MSCuomo ASEDeprez MDuclos GFine DFischer DSGhazanfar SGillich AGiotti BGould JGuo MGutierrez AJHabermann ACHarvey THe PHou XHu LHu YJaiswal AJi LJiang PKapellos TSKuo CSLarsson LLeney-Greene MALim KLitviňuková MLudwig LSLukassen SLuo WMaatz HMadissoon EMamanova LManakongtreecheep KLeroy SMayr CHMbano IMMcAdams AMNabhan ANNyquist SKPenland LPoirion OBPoli SQi CQueen RReichart DRosas ISchupp JCShea CVShi XSinha RSit RVSlowikowski KSlyper MSmith NPSountoulidis AStrunz MSullivan TBSun DTalavera-López CTan PTantivit JTravaglini KJTucker NRVernon KAWadsworth MHWaldman JWang XXu KYan WZhao WZiegler CGK Single-cell meta-analysis of SARS-CoV-2 entry genes across tissues and demographics.; Nature medicine. 2021 Mar 02. Masci AMWhite SNeely BArdini-Polaske MHill CBMisra RSAronow BGaddis NYang LWert SEPalmer SMChan C Ontology-guided segmentation and object identification for developmental mouse lung immunofluorescent images.; BMC bioinformatics; Vol 22(1). 2021 Feb 23. Freeman AQiao LOlave NRezonzew GGentle SHalloran BPryhuber GSGaggar ATipple TEAmbalavanan NLal CV MicroRNA 219-5p inhibits alveolarization by reducing platelet derived growth factor receptor-alpha.; Respiratory research; Vol 22(1). 2021 Feb 17. Kalininskiy AKittel JNacca NEMisra RSCroft DPMcGraw MD E-cigarette exposures, respiratory tract infections, and impaired innate immunity: a narrative review.; Pediatric medicine (Hong Kong, China); Vol 4. 2021 Feb. Cohen EDYee MPorter GARitzer EEMcDavid ANBrookes PSPryhuber GSO'Reilly MA Neonatal hyperoxia inhibits proliferation and survival of atrial cardiomyocytes by suppressing fatty acid synthesis.; JCI insight. 2021 Jan 28. Misra RMulligan JKRowland-Jones SZemlin M Editorial: Autoimmunity and Chronic Inflammation in Early Life.; Frontiers in immunology; Vol 12. 2021. Higano NSThomen RPQuirk JDHuyck HLHahn ADFain SBPryhuber GSWoods JC Alveolar Airspace Size in Healthy and Diseased Infant Lungs Measured via Hyperpolarized 3He Gas Diffusion Magnetic Resonance Imaging.; Neonatology. 2020 Nov 11. Wang AChiou JPoirion OBBuchanan JValdez MJVerheyden JMHou XKudtarkar PNarendra SNewsome JMGuo MFaddah DAZhang KYoung REBarr JSajti EMisra RHuyck HRogers LPoole CWhitsett JAPryhuber GXu YGaulton KJPreissl SSun X Single cell multiomic profiling of human lung reveals cell type-specific and age-dynamic control of SARS-CoV2 host genes.; eLife; Vol 9. 2020 Nov 09. Chu CYQiu XMcCall MNWang LCorbett AHolden-Wiltse JSlaunwhite CGrier AGill SRPryhuber GSFalsey ARTopham DJCaserta MTWalsh EEMariani TJ Airway gene expression correlates of RSV disease severity and microbiome composition in infants.; The Journal of infectious diseases. 2020 Sep 14. Dylag AMKopin HGO'Reilly MAWang HDavis SDRen CLPryhuber GS Early Neonatal Oxygen Exposure Predicts Pulmonary Morbidity and Functional Deficits at 1 Year.; The Journal of pediatrics; Vol 223. 2020 Aug. McDavid ACorbett AMDutra JLStraw AGTopham DJPryhuber GSCaserta MTGill SRScheible KMHolden-Wiltse J Eight practices for data management to enable team data science.; Journal of clinical and translational science; Vol 5(1). 2020 Jun 23. Shah DSandhu KDas PAghai ZHAndersson SPryhuber GBhandari V miR-184 mediates hyperoxia-induced injury by targeting cell death and angiogenesis signalling pathways in the developing lung.; The European respiratory journal. 2020 May 26. Voynow JAFisher KSunday MECotten CMHamvas AHendricks-Muñoz KDPoindexter BBPryhuber GSRen CLRyan RMSharp JKYoung SPZhang HGreenberg RGHerring AHDavis SD Urine gastrin-releasing peptide in the first week correlates with bronchopulmonary dysplasia and post-prematurity respiratory disease.; Pediatric pulmonology; Vol 55(4). 2020 Apr. Li CSmith SMPeinado NGao FLi WLee MKZhou BBellusci SPryhuber GSHo HHBorok ZMinoo P WNT5a-ROR Signaling Is Essential for Alveologenesis.; Cells; Vol 9(2). 2020 Feb 07. Bhattacharya SMereness JABaran AMMisra RSPeterson DRRyan RMReynolds AMPryhuber GSMariani TJ Lymphocyte-Specific Biomarkers Associated With Preterm Birth and Bronchopulmonary Dysplasia.; Frontiers in immunology; Vol 11. 2020. Myti DGunjak MCasado FKhaghani Raziabad SNardiello CVadász IHerold SPryhuber GSeeger WMorty RE Elevated FiO2 increases SARS-CoV-2 co-receptor expression in respiratory tract epithelium.; American journal of physiology. Lung cellular and molecular physiology; Vol 319(4). 2020 Jan 01. Misra RSNayak JL The Importance of Vaccinating Children and Pregnant Women against Influenza Virus Infection.; Pathogens (Basel, Switzerland); Vol 8(4). 2019 Nov 26. Anderson CSChu CYWang QMereness JARen YDonlon KBhattacharya SMisra RSWalsh EEPryhuber GSMariani TJ CX3CR1 as a respiratory syncytial virus receptor in pediatric human lung.; Pediatric research. 2019 Nov 14. Steiner LAGetman MSchiralli Lester GMIqbal MAKatzman PSzafranski PStankiewicz PBhattacharya SMariani TPryhuber GLin XYoung JLDean DAScheible K Disruption of normal patterns of FOXF1 expression in a lethal disorder of lung development.; Journal of medical genetics. 2019 Oct 29. Li CLee MKGao FWebster SDi HDuan JYang CYBhopal NPeinado NPryhuber GSmith SMBorok ZBellusci SMinoo P Secondary crest myofibroblast PDGFRα controls the elastogenesis pathway via a secondary tier of signaling networks during alveologenesis.; Development (Cambridge, England); Vol 146(15). 2019 Aug 09. Caserta MTYang HBandyopadhyay SQiu XGill SRJava JMcDavid AFalsey ARTopham DJHolden-Wiltse JScheible KPryhuber G Measuring the Severity of Respiratory Illness in the First 2 Years of Life in Preterm and Term Infants.; The Journal of pediatrics. 2019 Jul 31. Du YClair GCAl Alam DDanopoulos SSchnell DKitzmiller JAMisra RSBhattacharya SWarburton DMariani TJPryhuber GSWhitsett JAAnsong CXu Y Integration of transcriptomic and proteomic data identifies biological functions in cell populations from human infant lung.; American journal of physiology. Lung cellular and molecular physiology. 2019 Jul 03. Stone SLPeel JNScharer CDRisley CAChisolm DASchultz MDYu BBallesteros-Tato AWojciechowski WMousseau BMisra RSHanidu AJiang HQi ZBoss JMRandall TDBrodeur SRGoldrath AWWeinmann ASRosenberg AFLund FE T-bet Transcription Factor Promotes Antibody-Secreting Cell Differentiation by Limiting the Inflammatory Effects of IFN-γ on B Cells.; Immunity; Vol 50(5). 2019 May 21. Jiang YLuo YTang YMoats RWarburton DZhou SLou JPryhuber GSShi WWang LL Alteration of cystic airway mesenchyme in congenital pulmonary airway malformation.; Scientific reports; Vol 9(1). 2019 Mar 28. Wang QBhattacharya SMereness JAAnderson CLillis JAMisra RSRomas SHuyck HHowell ABandyopadhyay GDonlon KMyers JRAshton JPryhuber GSMariani TJ A novel in vitro model of primary human pediatric lung epithelial cells.; Pediatric research. 2019 Feb 18. Ali MHeyob KTipple TEPryhuber GSRogers LK Alterations in VASP phosphorylation and profilin1 and cofilin1 expression in hyperoxic lung injury and BPD.; Respiratory research; Vol 19(1). 2018 Nov 21. Grier AMcDavid AWang BQiu XJava JBandyopadhyay SYang HHolden-Wiltse JKessler HAGill ALHuyck HFalsey ARTopham DJScheible KMCaserta MTPryhuber GSGill SR Neonatal gut and respiratory microbiota: coordinated development through time and space.; Microbiome; Vol 6(1). 2018 Oct 26. Syed MAShah DDas PAndersson SPryhuber GBhandari V TREM-1 Attenuates RIPK3 Mediated Necroptosis in Hyperoxia Induced Lung Injury in Neonatal Mice.; American journal of respiratory cell and molecular biology. 2018 Oct 03. Kyle JEClair GBandyopadhyay GMisra RSZink EMBloodsworth KJShukla AKDu YLillis JMyers JRAshton JBushnell TCochran MDeutsch GBaker ESCarson JPMariani TJXu YWhitsett JAPryhuber GAnsong C Cell type-resolved human lung lipidome reveals cellular cooperation in lung function.; Scientific reports; Vol 8(1). 2018 Sep 07. Bandyopadhyay GHuyck HLMisra RSBhattacharya SWang QMereness JLillis JAMyers JRAshton JBushnell TCochran MHolden-Wiltse JKatzman PDeutsch GHWhitsett JAXu YMariani TJPryhuber GS Dissociation, Cellular Isolation and Initial Molecular Characterization of Neonatal and Pediatric Human Lung Tissues.; American journal of physiology. Lung cellular and molecular physiology. 2018 Jul 05. Pryhuber GS Renewed Promise of Non-ionizing Radiation Imaging for Chronic Lung Disease in Preterm Infants.; American journal of respiratory and critical care medicine. 2018 Jun 26. Luo YLi NChen HFernandez GEWarburton DMoats RMecham RPKrenitsky DPryhuber GSShi W Spatial and temporal changes in extracellular elastin and laminin distribution during lung alveolar development.; Scientific reports; Vol 8(1). 2018 May 29. Zhu YClair GChrisler WShen YZhao RShukla AMoore RMisra RPryhuber GSmith RAnsong CKelly RT Proteomic analysis of single mammalian cells enabled by microfluidic nanodroplet sample preparation and ultrasensitive nanoLC-MS.; Angewandte Chemie (International ed. in English). 2018 May 24. Scheible KMEmo JLaniewski NBaran AMPeterson DRHolden-Wiltse JBandyopadhyay SStraw AGHuyck HAshton JMTripi KSArul KWerner EScalise TMaffett DCaserta MRyan RMReynolds AMRen CLTopham DJMariani TJPryhuber GS T cell developmental arrest in former premature infants increases risk of respiratory morbidity later in infancy.; JCI insight; Vol 3(4). 2018 Feb 22. Mereness JABhattacharya SWang QRen YPryhuber GSMariani TJ Type VI collagen promotes lung epithelial cell spreading and wound-closure.; PloS one; Vol 13(12). 2018. Grier AQiu XBandyopadhyay SHolden-Wiltse JKessler HAGill ALHamilton BHuyck HMisra SMariani TJRyan RMScholer LScheible KMLee YHCaserta MTPryhuber GSGill SR Impact of prematurity and nutrition on the developing gut microbiome and preterm infant growth.; Microbiome; Vol 5(1). 2017 Dec 11. Syed MDas PPawar AAghai ZHKaskinen AZhuang ZWAmbalavanan NPryhuber GAndersson SBhandari V Hyperoxia causes miR-34a-mediated injury via angiopoietin-1 in neonatal lungs.; Nature communications; Vol 8(1). 2017 Oct 27. D'Angio CTWyman CPMisra RSHalliley JLWang HHunn JEFallone CMLee FE Plasma cell and serum antibody responses to influenza vaccine in preterm and full-term infants.; Vaccine. 2017 Aug 11. Domm WYee MMisra RSGelein RNogales AMartinez Sobrido LO'Reilly MA Oxygen-dependent changes in lung development do not affect epithelial infection with influenza A virus.; American journal of physiology. Lung cellular and molecular physiology. 2017 Aug 10. Ardini-Poleske MEClark RFAnsong CCarson JPCorley RADeutsch GHHagood JSKaminski NMariani TJPotter SSPryhuber GSWarburton DWhitsett JAPalmer SMAmbalavanan NLungMAP Consortium T LungMAP: The Molecular Atlas of Lung Development Program.; American journal of physiology. Lung cellular and molecular physiology. 2017 Aug 10. D'Angio CTWang HHunn JEPryhuber GSChess PRLakshminrusimha S Permission form synopses to improve parents' understanding of research: a randomized trial.; Journal of perinatology : official journal of the California Perinatal Association; Vol 37(6). 2017 Jun. Durrani-Kolarik SPool CAGray AHeyob KMCismowski MJPryhuber GSLee LJYang ZTipple TERogers LK Mir-29b Supplementation Decreases Expression of Matrix Proteins and Improves Alveolarization in Mice Exposed to Maternal Inflammation and Neonatal Hyperoxia.; American journal of physiology. Lung cellular and molecular physiology. 2017 May 04. Oleksyn DZhao JVosoughi AZhao JCMisra RPentland APRyan DAnolik JRitchlin CLooney JAnandarajah APSchwartz GCalvi LMGeorger MMohan CSanz IChen L PKK deficiency in B cells prevents lupus development in Sle lupus mice.; Immunology letters; Vol 185. 2017 Mar 06. Caserta MTYang HGill SRHolden-Wiltse JPryhuber G Viral Respiratory Infections in Preterm Infants during and after Hospitalization.; The Journal of pediatrics; Vol 182. 2017 Mar. Du YKitzmiller JASridharan APerl AKBridges JPMisra RSPryhuber GSMariani TJBhattacharya SGuo MPotter SSDexheimer PAronow BJobe AHWhitsett JAXu Y Lung Gene Expression Analysis (LGEA): an integrative web portal for comprehensive gene expression data analysis in lung development.; Thorax. 2017 Jan 09. Groves AMJohnston CJMisra RSWilliams JPFinkelstein JN Effects of IL-4 on Pulmonary Fibrosis and the Accumulation and Phenotype of Macrophage Subpopulations Following Thoracic Irradiation.; International journal of radiation biology. 2016 Aug 19. Misra RSBhattacharya SHuyck HLWang JESlaunwhite CGSlaunwhite SLWightman TRSecor-Socha SMisra SKBushnell TPReynolds AMRyan RMQuataert SAPryhuber GSMariani TJ Flow-based sorting of neonatal lymphocyte populations for transcriptomics analysis.; Journal of immunological methods. 2016 Jul 18. Angara SSyed MDas PJanér CPryhuber GRahman AAndersson SHomer RJBhandari V Inhibition of RPTOR Prevents Hyperoxia-induced Lung Injury by Enhancing Autophagy and Reducing Apoptosis in Neonatal Mice.; American journal of respiratory cell and molecular biology. 2016 Jul 2. Misra RS The Microbiome, Antibiotics, and Health of the Pediatric Population.; EC microbiology; Vol 3(1). 2016 Mar. Groves AMJohnston CJMisra RSWilliams JPFinkelstein JN Whole-Lung Irradiation Results in Pulmonary Macrophage Alterations that are Subpopulation and Strain Specific.; Radiation research; Vol 184(6). 2015 Dec. Scheible KMEmo JYang HHolden-Wiltse JStraw AHuyck HMisra STopham DJRyan RMReynolds AMMariani TJPryhuber GS Developmentally determined reduction in CD31 during gestation is associated with CD8+ T cell effector differentiation in preterm infants.; Clinical immunology (Orlando, Fla.); Vol 161(2). 2015 Dec. Pryhuber GS Postnatal Infections and Immunology Affecting Chronic Lung Disease of Prematurity.; Clinics in perinatology; Vol 42(4). 2015 Dec. Kallapur SGPryhuber GS Bronchopulmonary Dysplasia--The Search for Answers Continues.; Clinics in perinatology; Vol 42(4). 2015 Dec. Rogers LKRobbins MDakhlallah DYang ZLee LJMikhail MNuovo GPryhuber GSMcGwin GMarsh CBTipple TE Attenuation of miR-17∼92 Cluster in Bronchopulmonary Dysplasia.; Annals of the American Thoracic Society; Vol 12(10). 2015 Oct. Misra RSJohnston CJGroves AMDeDiego MLSt Martin JReed CHernady EMiller JNLove TFinkelstein JNWilliams JP Examining the Effects of External or Internal Radiation Exposure of Juvenile Mice on Late Morbidity after Infection with Influenza A.; Radiation research; Vol 184(1). 2015 Jul. Misra RShah SFowell DWang HScheible KMisra SHuyck HWyman CRyan RMReynolds AMMariani TKatzman PJPryhuber GS Preterm cord blood CD4⁺ T cells exhibit increased IL-6 production in chorioamnionitis and decreased CD4⁺ T cells in bronchopulmonary dysplasia.; Human immunology; Vol 76(5). 2015 May. Maitre NLBallard RAEllenberg JHDavis SDGreenberg JMHamvas APryhuber GS Respiratory consequences of prematurity: evolution of a diagnosis and development of a comprehensive approach.; Journal of perinatology : official journal of the California Perinatal Association; Vol 35(5). 2015 May. Pryhuber GSMaitre NLBallard RACifelli DDavis SDEllenberg JHGreenberg JMKemp JMariani TJPanitch HRen CShaw PTaussig LMHamvas A Prematurity and respiratory outcomes program (PROP): study protocol of a prospective multicenter study of respiratory outcomes of preterm infants in the United States.; BMC pediatrics; Vol 15. 2015. Domm WMisra RSO'Reilly MA Affect of Early Life Oxygen Exposure on Proper Lung Development and Response to Respiratory Viral Infections.; Frontiers in medicine; Vol 2. 2015. Bozyk PDBentley JKPopova APAnyanwu ACLinn MDGoldsmith AMPryhuber GSMoore BBHershenson MB Correction: Neonatal Periostin Knockout Mice Are Protected from Hyperoxia-Induced Alveolar Simplication.; PloS one; Vol 10(6). 2015. Popova APCui TXKaciroti NGoldsmith AMLinn MJPryhuber GSHershenson MB Tracheal Aspirate Levels of the Matricellular Protein SPARC Predict Development of Bronchopulmonary Dysplasia.; PloS one; Vol 10(12). 2015. Dardas MGill SRGrier APryhuber GSGill ALLee YHGuillet R The impact of postnatal antibiotics on the preterm intestinal microbiome.; Pediatric research; Vol 76(2). 2014 Aug. Popova APBentley JKCui TXRichardson MNLinn MJLei JChen QGoldsmith AMPryhuber GSHershenson MB Reduced platelet-derived growth factor receptor expression is a primary feature of human bronchopulmonary dysplasia.; American journal of physiology. Lung cellular and molecular physiology; Vol 307(3). 2014 Aug 1.